| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0790 |
|---|
| Symbol | |
|---|
| ID | 6876754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 752165 |
|---|
| End bp | 753307 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642788671 |
|---|
| Product | carbamoyl-phosphate synthase, small subunit |
|---|
| Protein accession | YP_002219247 |
|---|
| Protein GI | 198282926 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
|---|
| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCGG TCTTGGCATT GGCAGACGGC AGCATCTATC GCGGTATAGG CTTTGGTGCC
ACCGGATTGG CAGCAGGTGA AATCTGTTTT AACACCGCCA TGAGTGGCTA CCAGGAGATC
CTTTCTGATC CCTCGTATCA GGGACAGATC ATCACGCTCA CTTATCCCCA TATCGGCAAT
ACCGGGGTCA ACCCGGAGGA CATGGAAGGT ACCCGGATAT TCTGCTCCGC TCTCGTCGTG
CGCAATCTGC CACGGCAACC CAGCAGTTGG CGCAGCACCC AGGACCTGGC CTCCTTCCTG
CAGACCCATC GAATTCCCGG CATCGCGGGA ATCGACACCC GCGCTCTGAC CCGCAGACTG
CGGGATAGCG GCGCTCAGAA TGCTGCCGTC CTCGTCGGAG AAGCGGCCAG CGAAGAGAAG
GCCCTGGCTG CGGCGCGCGC TTTCCCAGGC CTCATCGGCC GTGATCTGGT GCAGGATGTG
GGCTGCCGGG AGGCATACAC CTGGGATCTC GCCAGCGGCA CCCCCGAACA GGGCTATCAC
GCGCAGGCCG TCACCCGGAC ACAGTGCCAT GTGGTGGTCT ACGATTTCGG CACCAAACGG
AATATCCTGC GCCTGCTGGC GGATCGGGCC TGCCGAATCA CGGTGGTGCC GGCCCGCACC
GCGGCCGCCG AGGTGATCGC CCTGCGCCCG GACGGCATAC TCTTCTCCAA TGGTCCCGGT
GACCCAGCGG CCCTCGGCTA TGCGGAAGAG GCCATGCGCC AAGTCATCGC CACGGGTATT
CCCACCTTCG GACTCTGTCT GGGGCATCAG TTGCTGGGAC GGGCCCTGGG CGCCAAAACC
GTCAAGATGA AGTTCGGGCA CCACGGTGCC AACCATCCGG TCAAAGACCT GCGCAGCGGT
CGGGTGTTGA TCACCAGTCA GAACCACGGT TTCGCGGTGG ACGCGGACAC CCTGCCGGAG
TGCCTGGTGG CGACCCATGC CTCACTGTTC GACGGCAGCC TGCAGGGCAT GGCGCATCGG
GAGCTGCCCG TATTTTCCTT TCAGGGCCAC CCTGAGGCCG GACCCGGGCC CCACGACGCC
CGTGCAATTT TTGACGACTT CGTTCACGCC ATGAACCAGT ACGGAGGCCG TCACCATGCC
TAA
|
|---|
| Protein sequence | MQAVLALADG SIYRGIGFGA TGLAAGEICF NTAMSGYQEI LSDPSYQGQI ITLTYPHIGN
TGVNPEDMEG TRIFCSALVV RNLPRQPSSW RSTQDLASFL QTHRIPGIAG IDTRALTRRL
RDSGAQNAAV LVGEAASEEK ALAAARAFPG LIGRDLVQDV GCREAYTWDL ASGTPEQGYH
AQAVTRTQCH VVVYDFGTKR NILRLLADRA CRITVVPART AAAEVIALRP DGILFSNGPG
DPAALGYAEE AMRQVIATGI PTFGLCLGHQ LLGRALGAKT VKMKFGHHGA NHPVKDLRSG
RVLITSQNHG FAVDADTLPE CLVATHASLF DGSLQGMAHR ELPVFSFQGH PEAGPGPHDA
RAIFDDFVHA MNQYGGRHHA
|
|---|
| |