Gene Lferr_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0553 
Symbol 
ID6876515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp516923 
End bp517384 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content56% 
IMG OID642788436 
Productprotein of unknown function DUF150 
Protein accessionYP_002219014 
Protein GI198282693 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.169356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAACG TGGAAGATCG ACTGTATGAA GGAATTGCGC AACAAGCCGG GATTGCAGGA 
TGCACCCTGG TAGACGCACG CATGGTGCGC ACGGGGCGCG CAGTGGCGTT ACAGGTCTTC
ATAGAAAAGG ATGAAACCAC CGCGGTTACC ATCGAGGATT GTGCGGCGGT GAGTCGCCAG
CTCAGTCTGT GGCTCGATGT GGAAAACCCG ATCCATGGCG CCTACCGCCT GGAAGTGTCC
AGCCCCGGCC TGGACAGGCC GCTAAAAAAT TTACACGACT TTGAACGATT TAAGGGGTCT
CAGGCCGAGA TTCACCTGCA TGGGTTGACG CAAGGGCGGC GCCGCTTGCA GGGTGAACTG
CTGGGCGTTG AAGATCAGAA AATTGTATTG AAAAATGCCG AAGGGCGCTG GACCTTTGCC
CTGGATGATA TCCACAAGGC AAGGCTGGTT CCCCAATGGT GA
 
Protein sequence
MVNVEDRLYE GIAQQAGIAG CTLVDARMVR TGRAVALQVF IEKDETTAVT IEDCAAVSRQ 
LSLWLDVENP IHGAYRLEVS SPGLDRPLKN LHDFERFKGS QAEIHLHGLT QGRRRLQGEL
LGVEDQKIVL KNAEGRWTFA LDDIHKARLV PQW