Gene Lferr_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0322 
Symbol 
ID6876273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp306662 
End bp307060 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content55% 
IMG OID642788195 
ProductRhodanese domain protein 
Protein accessionYP_002218783 
Protein GI198282462 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.089082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAGT CGGTAATAAA CCTCGCCCCG CAGGACGCCT TCCACTTCCT GCAGAAAAAC 
CCGCAGGCGG TGCTTATTGA CGTCAGAAGT GAAATGGAGT TTCTGTTCGT CGGGCACCCG
AAAGAAGCGT TAACCATCCC CTGGCGAGAC GATCCTGACT GGGAAATCAA CCCGGACTTT
CTGTGTCGGG TACGACGCGC CACATCTCTC AACCGACCCG TCTTACTGAT CTGCCGTAGC
GGCCATCGCT CGCTGGAGGC TGGACAGTAC TTACAGGCCA ATGGTTTCAG CGCCGTTTAC
AATGTGGCGC ATGGCTTTGA AGGGGATCTG AACGATCAGC ATCGCCGCAG CAGCCTGAAT
GGCTGGCGCT TTGATGGACT ACCCTGGGAG CAAATATAA
 
Protein sequence
MTKSVINLAP QDAFHFLQKN PQAVLIDVRS EMEFLFVGHP KEALTIPWRD DPDWEINPDF 
LCRVRRATSL NRPVLLICRS GHRSLEAGQY LQANGFSAVY NVAHGFEGDL NDQHRRSSLN
GWRFDGLPWE QI