Gene Lferr_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0223 
Symbol 
ID6876173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp209714 
End bp210067 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content46% 
IMG OID642788099 
Producthypothetical protein 
Protein accessionYP_002218688 
Protein GI198282367 
COG category[L] Replication, recombination and repair 
COG ID[COG1637] Predicted nuclease of the RecB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.178358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATAA GAACAACTTT ATGGAAAATC GATCACAGGC CATTGGAGTT GCTGGAATCT 
TCATTGGCCG ATGAAGAATT GCTTGAAGAT ATGATTGTTG CAGAGCCACG TATGTTGTCC
GATGAGTGGA TGCTTATCGG TCGCCAAGTA AAGACAGGCT TCGGCGGGAT CATTGACCTG
CTAGCTATAG CGCCTGACGG CTCGCTGGTG ATCATCGAAC TTAAACGAGA TCGTACTCCA
CGCCAAGTGG TGGCGCAGGC ACTCGACTAC GCCTTCTGGG TTGAGAAACT TAATGACGAG
AGCATTGAAA CTATCTATGA GAAATTTTCT TCAGGAAAGG ATATAGCTGT ATGA
 
Protein sequence
MPIRTTLWKI DHRPLELLES SLADEELLED MIVAEPRMLS DEWMLIGRQV KTGFGGIIDL 
LAIAPDGSLV IIELKRDRTP RQVVAQALDY AFWVEKLNDE SIETIYEKFS SGKDIAV