Gene Lferr_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0173 
Symbol 
ID6876123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp165003 
End bp165749 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content61% 
IMG OID642788050 
Productcytochrome B561 
Protein accessionYP_002218639 
Protein GI198282318 
COG category[C] Energy production and conversion 
COG ID[COG1969] Ni,Fe-hydrogenase I cytochrome b subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.551563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTGG CAACGGACAC CCGCTATATC CTGCACCCTG TCTGGGACCC GCTGCTGCGG 
GCACTGCATT GGTGGATGGC GCTTGCCATG ATGGCGCAAT TCACCTCAGG CGCGACCCTC
CTGGCCCTGG GTAATGACAT GTCCGACGCC CTGATGGGGA AGATCGACAT CATCCATTAT
GTCGGCGGCT ATGCTTTCGC CGCCGCGCTG GTGGTGCGCA TCCTCTGGCT CTTTGTCGGC
CCGCCGACGG CGCGCTGGCG CGACCTCCTG CCCCTGACGT CAGCCCAGCG CCGTATCTGG
CGGGAAACCC TCTCCTGTTA TCTGAGCGGC TTCCGCCGCC CGATTTCCCC CTATCGGGGG
CATAACGCTT TCGCCGGCCC GGCCTACCTC GCCTTTTTCC TGATTGCCGT GGTACAGATC
GCCTTGGGTA TCAGCCTCTC GCTCATGCCG GACAGTGAAG CGATGAACTC CCCGTTGATG
GTGATGCATG AATGGGGGTT CTTTCTGCTG CTTGCCTTCG TCATTGTCCA TGTGGCGCTC
GTGATCGCGC ACGAGGTTGC GGGCCGCCAC GGTTTGATAT CGGCCATGAT CCACGGTCAC
AAGGGGTTCA CCGAGTCGGA ACACCAAGCC CTTCATGCCG ATTGGGACGC TGCGCTCGGT
GTCCAGGCGG ACCCGAGCGG CGGGACGAAA GGGCTGGACG ATATGACTTC AAATAACGGA
GATGCCACGA AAACCAGGCA TGAGTGA
 
Protein sequence
MMLATDTRYI LHPVWDPLLR ALHWWMALAM MAQFTSGATL LALGNDMSDA LMGKIDIIHY 
VGGYAFAAAL VVRILWLFVG PPTARWRDLL PLTSAQRRIW RETLSCYLSG FRRPISPYRG
HNAFAGPAYL AFFLIAVVQI ALGISLSLMP DSEAMNSPLM VMHEWGFFLL LAFVIVHVAL
VIAHEVAGRH GLISAMIHGH KGFTESEHQA LHADWDAALG VQADPSGGTK GLDDMTSNNG
DATKTRHE