Gene Lcho_4387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4387 
Symbol 
ID6161105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp4908454 
End bp4908924 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content69% 
IMG OID641667164 
Producthypothetical protein 
Protein accessionYP_001793403 
Protein GI171061054 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0594] RNase P protein component 
TIGRFAM ID[TIGR00188] ribonuclease P protein component, eubacterial 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0000465918 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGCAAA GCCTGACAGG AGCCAGCCGC TTTCAGGCGG TGATGGCCAC CCGTCCGTGC 
GCGCGCAGCG TTCATTTCAT GGTTCACCAC CTGGCTGCGG CCGGGTTGTC AACAGGGGCG 
CAAGCTGCTT CCGTCGAGGC TGTGGATGAC TCGCCTCGCC CGGTGGCCTT GCGACTCGGA 
ATGGTGGTGC CCAAGCGGCA CGCGCGCCGG TCCGTGACGC GCAGCCTGGT CAAGCGCGAG 
ATGCGCTCGG GTGTCGGCAA GGTCAGTGCC GTGCTGCCAT CCGGGGACTG GATCGTGCGC 
TTGCGCGCGC CGTTCGATCC CAAGCGTTAT CTGAGCGCCC GTTCGGAGGC ACTCGCGCAC 
GACGTGCGGG CCGAGCTGGC GCAGCTGATC TCCGATGCCT TGCGGCAGAC GACGTCCGTT 
CGCCGGCCGG CGGCTTCGCC GGCCTCGACC GCCCCGATGT CGGGCGCCTG A
 
Protein sequence
MLQSLTGASR FQAVMATRPC ARSVHFMVHH LAAAGLSTGA QAASVEAVDD SPRPVALRLG 
MVVPKRHARR SVTRSLVKRE MRSGVGKVSA VLPSGDWIVR LRAPFDPKRY LSARSEALAH 
DVRAELAQLI SDALRQTTSV RRPAASPAST APMSGA