| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4284 |
|---|
| Symbol | |
|---|
| ID | 6160631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 4793681 |
|---|
| End bp | 4794406 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641667061 |
|---|
| Product | DTW domain-containing protein |
|---|
| Protein accession | YP_001793300 |
|---|
| Protein GI | 171060951 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3148] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGCACCG CCTGCCTGAC CCACAGCGCC ACCCGCCCCC ATCTCGACCG CGGCAGCCCC
CGCAAGGAGC GCTGCGCCGG CTGCCGCCTG AGCCCCGGCC ATTGCATGTG CGCCTTGCGG
CCGGTGCTGC CCACGACTCA CGCTGGCGTG TGCCTGATCA TGGCCGAGTT CGAGCCACTC
AAGCCCAGCA ACACCGGCTG GCTGATTGCC GACGTGGTGC CCGACACCGC CGCCTTCGGC
TGGTCACGCA TGGCCGTCGA CCCCGCCCTG CTGGCGCTGC TGGCCGATCC GCAGTGGCAG
CCTTATGTGG TGTTCCCCGG CGAGTTCGTC GCGCCCGAGC GGGTGGTCAC CGAACTGCGG
TTGCCCGCCG CGCCCGATGC GGCCGTGCGC CCGCTCTTCG TGCTGCTCGA CGGCACCTGG
TCCGAGGCGC GCAAGATCTT TCGCAAGAGC CCCTGGCTGG AGCGCTTCCC GGTGCTGAGC
CTGCGGCCCG AACAGCTCTC ACGCTACCGC CTGCGCCGCT CCACCCACGC GCACCACTTC
TGCACCTCCG AAGTGGCCGC CCTGTGCCTG GCCCTGGCCG GCGACCTGCA TGCGGCACAG
ACGCTCGAAG CCTATCTGGA CGTCTACAGC AGCCGTTACC TGCGCGCCAA GCAGAGCGTG
CCGCCGGACA GCGAGGACGC GGCGCATCAG CGCTTGCGTG AACTGGGGCT GCAAGCGCCG
GTCTGA
|
|---|
| Protein sequence | MRTACLTHSA TRPHLDRGSP RKERCAGCRL SPGHCMCALR PVLPTTHAGV CLIMAEFEPL
KPSNTGWLIA DVVPDTAAFG WSRMAVDPAL LALLADPQWQ PYVVFPGEFV APERVVTELR
LPAAPDAAVR PLFVLLDGTW SEARKIFRKS PWLERFPVLS LRPEQLSRYR LRRSTHAHHF
CTSEVAALCL ALAGDLHAAQ TLEAYLDVYS SRYLRAKQSV PPDSEDAAHQ RLRELGLQAP
V
|
|---|
| |