| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4268 |
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| Symbol | |
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| ID | 6162244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4777083 |
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| End bp | 4777799 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641667045 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001793284 |
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| Protein GI | 171060935 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCCG ACGCACCGAT CGTCTTTCGC GCCCGCGACC TCGCCAAGGT CTACGGAAGC
GGCGAGGTCG AGGTGATCGC GCTGCACGAC GTCTCGCTGG AGATCGCGCG CGGCGAGTTC
GTGGTGCTGC TGGGCGCCTC GGGCAGCGGC AAGAGCACGC TGCTCAACAT CCTCGGCGGG
CTCGACGTGC CCACGCGCGG CGAGGTCAGC TTCGGCGATC ACCTCTTGAG CGGCGCCAGC
GAGGCCGAGC TGACACGCTA CCGGCGCGAG CACGTCGGCT TCGTGTTCCA GTTCTACAAC
CTGATCCCGA GCCTGACGGT GCGCGAGAAC GTCGCGCTCG TGACCGACAT CGCCGCGCAC
CCGATGGACA TCGACGAGGC CATCGCATTG GTCGACCTGA GCGCGCGGCG CGACCACTTT
CCGGCGCAGC TGTCGGGCGG CGAGCAGCAG CGCGTGGCGA TCGCGCGTGC CATCGTCAAG
AAGCCCGACG TGCTGCTGTG CGACGAGCCC ACCGGCGCGC TCGACTACAG CACCGGCAAG
CGCGTGCTCG ACGTCATCGC GCGCATCAAC CGCGAGCTGG GCACCACCGC GGTGGTGATC
ACGCACAACG CGGCCATCGC CGGCATGGCC GACCGCGTGA TCTACCTCGG CGACGGCCAC
ATCCTGCGGG TCGAACGCAA CGCGCACAAG GTGTCGCCGG CCGAGTTGAG CTGGTGA
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| Protein sequence | MPPDAPIVFR ARDLAKVYGS GEVEVIALHD VSLEIARGEF VVLLGASGSG KSTLLNILGG
LDVPTRGEVS FGDHLLSGAS EAELTRYRRE HVGFVFQFYN LIPSLTVREN VALVTDIAAH
PMDIDEAIAL VDLSARRDHF PAQLSGGEQQ RVAIARAIVK KPDVLLCDEP TGALDYSTGK
RVLDVIARIN RELGTTAVVI THNAAIAGMA DRVIYLGDGH ILRVERNAHK VSPAELSW
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