Gene Lcho_4243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4243 
Symbol 
ID6161132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4751566 
End bp4752096 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content72% 
IMG OID641667020 
Producthypothetical protein 
Protein accessionYP_001793259 
Protein GI171060910 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGGA TCTTCAACGT CATCAAGGCA CTGCTGCTGC TGCTGGTCGT CCTGGCCGCG 
GCGGCTTTTC TGTTGCCTGA ACGCCGGCTG GTCGAACGCA GCCGCGAAAT CGCCGCGCCG
CCCGAGCGCA TCTGGCCGCT GATCGCCGAG CCGCGGCGCT GGACTGCCTG GTCGCCCTGG
TATGCCAAGG ATCCGGCCAT GACCCTCACC TACGACGGTG CCGCCAGCGG TGCGGGTGCC
CAGTGGCGCT GGGACAGCGC CAGCCAGGGC CGCGGCCAGA TGCGGTTCGA CAGCGCCGAG
GCGCCGCGCC GGCTCGGCTA CACGCTGGTG TTCGAGGACA TGGGCACGCA AGCCACCGGC
GAGTTCCGCC TCGAGCCCGC GGGCGCCGGC ACGCGGGTGG TCTGGATGCT CGATTCGCAG
CTGGGCCACA ACCCGGTGAT GCGCTGGTTC GGCCTGGCGC TCGACCGCCT GGTCGGGCCG
GATTTCGACG CCGGCCTGCG CAGGCTCGAG TCGGCCGCGC TGGCGCGCTG A
 
Protein sequence
MRWIFNVIKA LLLLLVVLAA AAFLLPERRL VERSREIAAP PERIWPLIAE PRRWTAWSPW 
YAKDPAMTLT YDGAASGAGA QWRWDSASQG RGQMRFDSAE APRRLGYTLV FEDMGTQATG
EFRLEPAGAG TRVVWMLDSQ LGHNPVMRWF GLALDRLVGP DFDAGLRRLE SAALAR