| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4234 |
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| Symbol | |
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| ID | 6160901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4744612 |
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| End bp | 4745691 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641667011 |
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| Product | VanZ family protein |
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| Protein accession | YP_001793250 |
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| Protein GI | 171060901 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.375159 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTGA TCGTCTACGC CAGCCTGCAT CCGTTTTCGG GCTGGCACTG GCCCACCGTG
ACCGACACCG AGGGCTGGCT CGACCTGCTG TGGCTGCCCA CGCCACGCTC GTCGCGCTTC
GACCGCTGGG CCAATTTCCT GGCCTATCAG CCGCTCGGCC TGCTGCTGGC GATCGCCTGG
ATCCGCTCGG GCCACGGCAC CTGGCGGGCC TGCGTGCAGG CGACGCTGGC AGGCCTGCTG
CTGTCGCTGC TGATGGAGTG GACGCAGAAC CTGCTGCCGA TCCGCGTGCC GTCGCGCCTC
GATCTGGCGC TCAACGGCGC CGGCACGCTG CTCGGCGCGC TGCTGGCCGC GGCACTGCAG
GGCTTGGGGC TGGTGCGCTA CTGGCAGCGC CTGCGCGACC GCTGGTTCGT GCCGCACGGC
AACGCCGGCC TGGCGCTGCT GCTGACCTGG CCGGTGGCGC TGCTGTTTCC GCCGCCCTTG
CCGATGGGGC TCGGCGAGGG CCTGTCGCGC GCCGCGCTGG CCCTCGGCGA TGCGCTCGCC
GACACGGCGC TCGAAGGCTG GCTGCCGACA CCCGCCGCGC AGGGCCAGCT CGCACCCGGC
ACCGAGCTGA TCGCGATCGT GCTCGGCCTG ATGGCGCCGT GCTGGGTGGC CTTCGTGATG
TCGCGCCAGG TCGTCAACCG GCTGGTGCTG CTGGTCGGGG CGATGCTGCT CGGGCTGCTC
GCCACCACCT TGTCGACCGC GCTGAACTTC GGCCCCGAGC ATGCACTGAC CTGGGTCACG
CCGGTGCTGC GGCCGGCACT GGCCGGCGCG GTGCTGCTGA GCGTGGCGCT GGCGTTCCTG
CCGCGCCGGG TGGTGGCGGC ACTCGGGCTG GTCGGCATCA CCAGCCTGAT CGCGCTGATC
TCGCAGGCCG GCACCGACCC GTATTTCGCC TCCAGCCTGC AGGCCTGGGA GCAGGGCCGC
TTCATCCGCT TTCACGGGGT GGCGCAATGG GTCGGCTGGC TGTGGCCGTT CGCGGCGCTG
CTGTTCCTGA TGCTGCAGGT CGCCGAACGG CCCACCCACG CCGAGGTGGC TCGCCGGTGA
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| Protein sequence | MALIVYASLH PFSGWHWPTV TDTEGWLDLL WLPTPRSSRF DRWANFLAYQ PLGLLLAIAW
IRSGHGTWRA CVQATLAGLL LSLLMEWTQN LLPIRVPSRL DLALNGAGTL LGALLAAALQ
GLGLVRYWQR LRDRWFVPHG NAGLALLLTW PVALLFPPPL PMGLGEGLSR AALALGDALA
DTALEGWLPT PAAQGQLAPG TELIAIVLGL MAPCWVAFVM SRQVVNRLVL LVGAMLLGLL
ATTLSTALNF GPEHALTWVT PVLRPALAGA VLLSVALAFL PRRVVAALGL VGITSLIALI
SQAGTDPYFA SSLQAWEQGR FIRFHGVAQW VGWLWPFAAL LFLMLQVAER PTHAEVARR
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