| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4213 |
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| Symbol | |
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| ID | 6163805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4724109 |
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| End bp | 4724963 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666990 |
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| Product | putative periplasmic binding protein |
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| Protein accession | YP_001793229 |
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| Protein GI | 171060880 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00734029 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCTGC ACGACCTTCT TCGGCGCATC GGCCTCTGGC TGGCGGCCGC TTTTCTCTGC
ACGCCGGTGC TCGCACAAGA GGCGGGGGTC TACCGCTTCT CGCCGGTCAA CCAGTACGGC
ATCAACCTGA CGGCGGCCTA CTGGAATCCG ATCATCGGCT ACGTGTCCGA AAAAAGCGGC
GTCAAGCTGC AGCTCAAGAT CGGCCGCACC TCGGCCGACA CCACAGCCTT CGTGCTGGCG
CAGGAGGTCG AGTTCGTCTT CAGCAACCAC CTCTTCAGCC CCGAGCGTGA ACAGCTCGGC
TGGCGGGTCT TCGGCCGCCG CCAGACCCCG GCGGTCCATG CCCAGATCGT CGTGCCGGCC
GATTCGCCGA TCACCGACCT GGCCGCGCTG GCGGGCAAGG AGGTCGTCTT TCCCGGGCCC
GAGGCGCTGG TGTCCTACAA GTTCACGGCC GCGCACCTGA TGGCGCGCCA AGTCGAGTTC
AAGACGGTCT TCGGCGGCAA CACCGATGGC GCGCTGGCCC AGCTCTACAG CGGCAAGGCG
GCGGCGGCGG GCGTCAACTC GCAGCTGGTC GAGGGGTATG CGCGGCGCGA GGACAAGAAG
TACCGCGTGC TGTGGTCGTC GCCGCCGGTG CACGACCTGG CGCTGATGGC GTCGGCCAAG
GTGCCCGAGA AGGTTCGCCA GGCGGTGATC CAGGCCTTCG TGGGCATGCA TCAGGATCCC
AAGGGGCGCG ACATCCTGCA GCAGGCGTCG GTGCATGTCG GCCTGACTGC CGCCGCGCAT
TTCATGGCTT CCGACGGCAG CGAGTACTCG GCCTACCGCG ATTTCTATCG CACGGCGCCG
GCCTCGCTGC GCTGA
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| Protein sequence | MNLHDLLRRI GLWLAAAFLC TPVLAQEAGV YRFSPVNQYG INLTAAYWNP IIGYVSEKSG
VKLQLKIGRT SADTTAFVLA QEVEFVFSNH LFSPEREQLG WRVFGRRQTP AVHAQIVVPA
DSPITDLAAL AGKEVVFPGP EALVSYKFTA AHLMARQVEF KTVFGGNTDG ALAQLYSGKA
AAAGVNSQLV EGYARREDKK YRVLWSSPPV HDLALMASAK VPEKVRQAVI QAFVGMHQDP
KGRDILQQAS VHVGLTAAAH FMASDGSEYS AYRDFYRTAP ASLR
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