50 homologs were found in PanDaTox collection
for query gene Lcho_4213 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_4213  putative periplasmic binding protein  100 
 
 		 284 aa  584  1e-166  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00734029 
 
 
-
 
NC_007005  Psyr_4494  phosphate/phosphonate ABC transporter periplasmic protein  55.28 
 
 		 283 aa  326  3e-88  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_3538  periplasmic binding protein-related protein  25.74 
 
 		 289 aa  67.8  0.0000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.0132329 
 
 
-
 
NC_007298  Daro_0241  periplasmic binding protein-related protein  27.88 
 
 		 276 aa  67  0.0000000003  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_3685  periplasmic binding protein-related protein  27.53 
 
 		 285 aa  64.3  0.000000002  Dechloromonas aromatica RCB  Bacteria  normal  0.758241  normal  1 
 
 
-
 
NC_007948  Bpro_4807  periplasmic binding protein-related protein  24.77 
 
 		 256 aa  63.2  0.000000004  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011138  MADE_03494  ABC-type phosphate/phosphonate transport system, periplasmic component  24.81 
 
 		 274 aa  62.4  0.000000008  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_2069  periplasmic binding protein-related protein  24.67 
 
 		 281 aa  61.2  0.00000002  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000112827 
 
 
-
 
NC_011146  Gbem_2154  periplasmic binding protein-related protein  24.32 
 
 		 281 aa  60.8  0.00000003  Geobacter bemidjiensis Bem  Bacteria  normal  0.365031  n/a   
 
 
-
 
NC_007413  Ava_4304  phosphonate-binding periplasmic protein  31.06 
 
 		 348 aa  60.1  0.00000004  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.0000531117  normal  1 
 
 
-
 
NC_009901  Spea_1433  phosphonate ABC transporter, periplasmic phosphonate-binding protein  25.97 
 
 		 287 aa  58.9  0.00000009  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_1536  phosphonate ABC transporter, periplasmic phosphonate-binding protein  23.25 
 
 		 274 aa  58.5  0.0000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_2753  phosphonate ABC transporter, periplasmic phosphonate-binding protein  24.04 
 
 		 292 aa  57.8  0.0000002  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_3670  phosphonate ABC transporter, periplasmic phosphonate-binding protein  25.71 
 
 		 307 aa  56.2  0.0000006  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_3535  phosphonate ABC transporter, periplasmic phosphonate-binding protein  24.07 
 
 		 283 aa  55.1  0.000001  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_2014  phosphonate ABC transporter, periplasmic phosphonate-binding protein  23.74 
 
 		 300 aa  55.1  0.000001  Shewanella sp. ANA-3  Bacteria  normal  0.440598  hitchhiker  0.00720049 
 
 
-
 
NC_008345  Sfri_3121  ABC-type phosphate/phosphonate transport system  25 
 
 		 269 aa  54.7  0.000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_3182  sensor histidine kinase  23.98 
 
 		 609 aa  54.7  0.000002  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007520  Tcr_1221  phosphonate-binding periplasmic protein  24.29 
 
 		 302 aa  53.9  0.000003  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_1986  phosphonate ABC transporter, periplasmic phosphonate-binding protein  21.96 
 
 		 317 aa  53.1  0.000005  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A0608  hypothetical protein  22.98 
 
 		 270 aa  52.8  0.000006  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_1703  phosphonate ABC transporter, periplasmic phosphonate-binding protein  23.64 
 
 		 306 aa  52.4  0.000008  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_1928  phosphonate ABC transporter, periplasmic phosphonate-binding protein  24.11 
 
 		 287 aa  51.6  0.00001  Magnetococcus sp. MC-1  Bacteria  normal  0.368653  normal  0.70306 
 
 
-
 
NC_009831  Ssed_2942  phosphonate ABC transporter, periplasmic phosphonate-binding protein  23.74 
 
 		 306 aa  52  0.00001  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_3599  periplasmic binding protein-related protein  23.91 
 
 		 294 aa  52.4  0.00001  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_1352  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  24.04 
 
 		 267 aa  50.4  0.00003  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.000484922 
 
 
-
 
NC_012917  PC1_0895  phosphonate ABC transporter, periplasmic phosphonate binding protein  23.25 
 
 		 310 aa  49.3  0.00007  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_1153  phosphonate ABC transporter, periplasmic phosphonate-binding protein  21.69 
 
 		 303 aa  48.9  0.0001  Geobacter lovleyi SZ  Bacteria  normal  0.586989  n/a   
 
 
-
 
NC_008576  Mmc1_0734  phosphonate ABC transporter, periplasmic phosphonate-binding protein  22.59 
 
 		 285 aa  48.5  0.0001  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_1998  histidine kinase  21.14 
 
 		 617 aa  46.6  0.0005  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008043  TM1040_3233  phosphonate-binding periplasmic protein  23.38 
 
 		 326 aa  46.2  0.0005  Ruegeria sp. TM1040  Bacteria  normal  0.73019  normal  1 
 
 
-
 
NC_009832  Spro_1411  phosphonate ABC transporter, periplasmic phosphonate-binding protein  22.94 
 
 		 310 aa  46.6  0.0005  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012912  Dd1591_2682  phosphonate ABC transporter, periplasmic phosphonate binding protein  24.85 
 
 		 310 aa  46.2  0.0006  Dickeya zeae Ech1591  Bacteria  hitchhiker  0.00143735  n/a   
 
 
-
 
NC_011769  DvMF_1258  phosphonate ABC transporter, periplasmic phosphonate-binding protein  22.22 
 
 		 302 aa  46.2  0.0006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.000000122601 
 
 
-
 
NC_009901  Spea_3040  histidine kinase  24.89 
 
 		 594 aa  45.8  0.0007  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_2408  phosphonate ABC transporter, periplasmic phosphonate-binding protein  23.94 
 
 		 345 aa  44.7  0.002  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007519  Dde_0601  phosphonate-binding periplasmic protein  23.23 
 
 		 339 aa  44.7  0.002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_3623  phosphonate ABC transporter, periplasmic phosphonate-binding protein  22.76 
 
 		 304 aa  44.3  0.002  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011901  Tgr7_1117  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  21.59 
 
 		 283 aa  44.3  0.002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_0350  phosphonate ABC transporter, periplasmic phosphonate-binding protein  17.54 
 
 		 285 aa  43.9  0.003  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_02550  phosphonate transport system substrate-binding protein  24.15 
 
 		 296 aa  43.9  0.003  Azotobacter vinelandii DJ  Bacteria  decreased coverage  0.00474506  n/a   
 
 
-
 
NC_007948  Bpro_2236  phosphonate-binding periplasmic protein  21.46 
 
 		 289 aa  43.5  0.004  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.366472 
 
 
-
 
NC_010465  YPK_2877  phosphonate ABC transporter, periplasmic phosphonate binding protein  22.11 
 
 		 309 aa  43.1  0.006  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_1320  phosphonate ABC transporter, periplasmic phosphonate binding protein  22.62 
 
 		 310 aa  43.1  0.006  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_17530  Phosphonate ABC transporter, periplasmic phosphate-binding protein  28.49 
 
 		 293 aa  42.7  0.006  Azotobacter vinelandii DJ  Bacteria  normal  0.688745  n/a   
 
 
-
 
NC_009708  YpsIP31758_2798  phosphonate ABC transporter, periplasmic phosphonate-binding protein  22.11 
 
 		 309 aa  43.1  0.006  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A1344  phosphonate ABC transporter periplasmic phosphonate-binding protein  22.11 
 
 		 309 aa  42.7  0.006  Yersinia pestis Angola  Bacteria  normal  1  normal  0.0522706 
 
 
-
 
NC_009438  Sputcn32_0535  histidine kinase  25.19 
 
 		 602 aa  42.4  0.008  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1232  phosphonate ABC transporter, periplasmic phosphonate-binding protein  20.19 
 
 		 321 aa  42.4  0.009  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_4066  integral membrane sensor signal transduction histidine kinase  22.51 
 
 		 613 aa  42.4  0.009  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
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