Gene Lcho_4155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4155 
Symbol 
ID6161158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp4659368 
End bp4659898 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content74% 
IMG OID641666932 
ProductUspA domain-containing protein 
Protein accessionYP_001793171 
Protein GI171060822 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA CCGATACCCC CGCGATCCCC ACCCCCGGCT GCACCGCCTG CGACGAACTC 
GGTCGCCTGG TGGCCGCCAG CTGGGGCACC GCTCCGGCGG CGGAACACGC CGGCCGCTGG 
CTGGTCGCCG TCGACGGCTC GCCAGGGTCC TTGCAGGCCG CATCGATGGC GGCGCAGCTG 
ACTGCGGCCG ATCCGCAGGC CGGGGTCGAC CTGGTGCATG TCGTCGCCTG GCTGGTCAAG 
GAGGCCGCCG AGGTGGAACT GCCGCGGCGC GGCTGGCACG TCAGCGCCGA CGCGCGTGCG 
CTGATGGACG ACGCCGGCAT CGCCTGGCGG CTGCACGTGC GCATGGGCGA CGCCGCCGAG 
CAGATCGTGG CGCTGGCCCG CGAGCTCGGC AGCCGCGGCA TCGTCATCGG CTCTCGGGGT 
CTGACGGCCA CCGAGTCGCT GCTGCTCGGC TCGGTCGCCT ACAAGGTCGT GCACCTGGGC 
AGGGTGCCGG TGCTGCTGGT GCCCCCCACA GGTCTGGCTG ATGGCGCTTG A
 
Protein sequence
MTRTDTPAIP TPGCTACDEL GRLVAASWGT APAAEHAGRW LVAVDGSPGS LQAASMAAQL 
TAADPQAGVD LVHVVAWLVK EAAEVELPRR GWHVSADARA LMDDAGIAWR LHVRMGDAAE 
QIVALARELG SRGIVIGSRG LTATESLLLG SVAYKVVHLG RVPVLLVPPT GLADGA