Gene Lcho_4127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4127 
Symbol 
ID6163756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp4634357 
End bp4634956 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content71% 
IMG OID641666905 
Producthypothetical protein 
Protein accessionYP_001793144 
Protein GI171060795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.878957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC GTGAGGGTCC TCTTCATCGG CAGGGCGGGC GAGCGGCGGC AGGGGCGCTG 
CTGCGTGCGG CGCTCGGGCG CCTGATGGCG CCGGGCCTCG CGCTGCTCGT CACGCTGGCC 
GTGGCGGCGC CGCCGTCGCC CTGGTTGCCG CTCGAGAAGG ACGGCCTGCA CGACCCGCGC 
GGCCCCGGCA TCTCGCAGCT GCAGCAGCCC GCCGAGGCGC TGGCCGCCCT GCCGCGCGAC 
ACCGCCGGCA ACCTGGTGCT GTGGGTCAAG GCGCTCGACG ACGGCCTGAT CGAGCCGCGT 
GCCAACCTGC TGCCCGGCAC GAAGGTGCGC CTGCTCGACC AGGACATCAT CATCGCCAAG 
TTCGGCTCGA TGCCGGCGGT CAAGTTTCCG CACCGCCAGC ACACCCTCTG GCTCGACTGC 
GAGAACTGCC ACAACAGCCT GTTCGTCGAC AAGATCGGCG CCAACAGGTT CAGCATGACC 
GCCATCCTCA ACGGCGAGCA GTGCGGCCTG TGCCACGGCG CGGTGTCGTT CCCGCTGACC 
GAGTGCAACC GCTGCCACAG CGTGCCCAAC GCGTCGCTGC GGCGCAGCGC CACGCCATGA
 
Protein sequence
MTQREGPLHR QGGRAAAGAL LRAALGRLMA PGLALLVTLA VAAPPSPWLP LEKDGLHDPR 
GPGISQLQQP AEALAALPRD TAGNLVLWVK ALDDGLIEPR ANLLPGTKVR LLDQDIIIAK 
FGSMPAVKFP HRQHTLWLDC ENCHNSLFVD KIGANRFSMT AILNGEQCGL CHGAVSFPLT 
ECNRCHSVPN ASLRRSATP