| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4114 |
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| Symbol | |
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| ID | 6163008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4620510 |
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| End bp | 4621643 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666892 |
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| Product | two component regulator propeller domain-containing protein |
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| Protein accession | YP_001793131 |
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| Protein GI | 171060782 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3292] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0168145 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCGGC GTTTCAGGCT CTTTGCGGCC ACCCTCATCG GCTTGGGCGT GGCGTTCGGC
GCGTGGGCGC AGGCGGCCCG GCCGGCTCCT GCTGCCGCTG CGGCGGCCTC CGCCGCGGCG
CAGAAGTTCA CCCACTTCCG GGTCGGCAAC AAGAACGTCA AGCGCCTGTT CGTCGACGGC
GATGTCGTCT GGGTCGGCAC CTCCGGCGGC GTGGTGCGCT ACGACACCCG CAGCGACGAC
TACAAGCTGT TCGACGTCAA GAGCGGCCTG CTGTCCAACG GCGTGTTCCA CGTCGGCAAG
CTCGACGGCC GCATCGTCGT CGGCACCTAC GGCGGCGGGC TGTCGCTGCT CGACCCCGTC
ACCGAAAAAT GGCAGACCTA CAACATCCCC GAAGGCCTGG GCGACGCCTT CGTCTACGAC
GTGCTGAAGG CCAAGAACGG CGACGTCTGG ATCGCCACCT GGTCGGGCGT GAACCGGGTG
CGCGGCGGCC GGCTCGATGA CCGCTCGCAG TGGGAGCTGC ACACGGTGGA AAGCACCCGC
GGCGGCCTGC CCAACGACTG GGTCTACGGC CTGGCCGAAG GGCGCGACGG CGAGATCTGG
CTCGGCACCG AAGGCGGCCT GGCGCAATTC AAGGACGGCA CCTGGCAGAA CTGGAACCAC
GCCCGCGGCC TGGGCGCCGA CTACGAACGC GTCAAGGACC AGGTGCGCTT CAAGACCGAC
CCGGCCAAGG TCTCCGAGCA CCACGCGCGC CAGAAGCAGG AGATGGGGCT GCAGGACATC
CAGGTCGCCT ACAACCCGAA CTACATGGTG TCGCTGGCGG TCGACGCGCA GGGTGTCGTC
TGGGCCGGCA CCTGGGGCGG CGGGCTGTCG CGCTTCGACG GCACCACATG GACCTCGTAC
ACCGTCGCCG AAGGCCTGCC CGGCAACCAC GTGTTCATGC TGCACATCGA CCCGTTGGGC
GTGCTGTGGG TCGGCACCGA CAACGGCCTG GCGAAGATGA ACGGTGGCCG CTTCGAGGTG
CTGACCACCG TCGACGGCCT GTTCAGCAAC ACCATCTTTT CGATGACCAC GGCGCTCGAC
GGCACGTTGT GGGTCGGCAG CTTCGGCGGT GTCGCCCGAC TCAAGCCGTT CTAG
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| Protein sequence | MVRRFRLFAA TLIGLGVAFG AWAQAARPAP AAAAAASAAA QKFTHFRVGN KNVKRLFVDG
DVVWVGTSGG VVRYDTRSDD YKLFDVKSGL LSNGVFHVGK LDGRIVVGTY GGGLSLLDPV
TEKWQTYNIP EGLGDAFVYD VLKAKNGDVW IATWSGVNRV RGGRLDDRSQ WELHTVESTR
GGLPNDWVYG LAEGRDGEIW LGTEGGLAQF KDGTWQNWNH ARGLGADYER VKDQVRFKTD
PAKVSEHHAR QKQEMGLQDI QVAYNPNYMV SLAVDAQGVV WAGTWGGGLS RFDGTTWTSY
TVAEGLPGNH VFMLHIDPLG VLWVGTDNGL AKMNGGRFEV LTTVDGLFSN TIFSMTTALD
GTLWVGSFGG VARLKPF
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