Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_4045 |
Symbol | |
ID | 6163232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4532324 |
End bp | 4533043 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641666823 |
Product | hypothetical protein |
Protein accession | YP_001793062 |
Protein GI | 171060713 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000000302623 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACACGC AACCCGATCC GCACCTCGCC GGCCAGCGCC GGCAACTGAT CCGGTGGCTG GCCGCGATGG CCTGCACCGG CGGCCTGGGC GCCGCGCGCG CGGCCACGCC GAGCGCCGCC GACGCCACCG CCGGCCTGCG GGCGGCGCTC GAATTCGGCG CCAAAGCCGC GGTCGCACAG CTGGGCAGGA CCGACGGCTT CCTGGCCAAT CCGCTGGTCC ACATCCCCCT GCCCGACACC CTGCAGCGCG CCGCCAAGCT GCTGCGCGCC ACCGGCCAGG GCAAGCGCCT CGACGAGCTC GAGACCGCGA TGAACCGCGC CGCCGAACTC GCCGTGCCCG AGGCCCAGAC GCTGCTGATC GACGCCGTCA AGAGCATGAC GGTGGACGAC GCGGCGCAGA TCCTGCGCGG CTCCGACACC GCGGTGACCG AGTTCTTCGC CGGCCGCACC CGCGAGCCGC TGGCCGAGAA GTTCCTGCCG ATCGTCAGCG CCGCCACCGA ACAGGTCTCG CTGGCCCGCA AGTACAACGC CGTGGCCTCG CGGGCCAGCC GCTTCGGCCT GCTGTCGGCC GAAAACGCCA ACCTGCAGCA GTTCGTCACC GGCAAGGCGC TCGACGGGCT CTACAAGATG ATCGGCGAGG AAGAAAAGAA GATCCGCCAG GACCCGGTCG CCACCGGCCA GGCGATCCTG CAGTCGGTCT TCGGTGCGCT CAAGAAGTGA
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Protein sequence | MHTQPDPHLA GQRRQLIRWL AAMACTGGLG AARAATPSAA DATAGLRAAL EFGAKAAVAQ LGRTDGFLAN PLVHIPLPDT LQRAAKLLRA TGQGKRLDEL ETAMNRAAEL AVPEAQTLLI DAVKSMTVDD AAQILRGSDT AVTEFFAGRT REPLAEKFLP IVSAATEQVS LARKYNAVAS RASRFGLLSA ENANLQQFVT GKALDGLYKM IGEEEKKIRQ DPVATGQAIL QSVFGALKK
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