| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4024 |
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| Symbol | |
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| ID | 6161694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4506505 |
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| End bp | 4507401 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641666804 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001793043 |
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| Protein GI | 171060694 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000078041 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAAGA CACTGCTGGT TTTCGCCGCC CTGATGGCCA TGGGTGCGGC CCAGGCGCAA
TCGGACACCC TCAAGAAGAT CAAGGACAGC GCCAGCGTCA CGATGGGCGT GCGCGAATCG
TCGGGTGCGC TGTCGCTCAC GCTGGGTGAC GGCAAGTACG TCGGCTACCA CGTCGAGCTG
TGCCAGCGTG CCCTGGCCGA CGTGCAGAAG CTGCTGGGCC TGCCCAAGCT CGACATCAAG
TACCAGGCGG TGACCTCGCA GAACCGCATC CCGCTGGTGC AGAACGGCAC CGTCGACATC
GAGTGCGGCT CGACCACCAA CAATGCCGCG CGCCAGAAGG ACGTGTCCTT CGCCGTCACC
ACCTACGTCG AGGAAGTGCG CATCGCGGTC AAGGGCAGCT CGGGCATCAC CTCGATCGCC
CAGCTGGGCG GCAAGAGCGT GGCCACCACC ACCGGCACGA CCTCGGTGCA GCTGCTGCGC
AAGCACGAGC GCGCCAATGG TGTCAACTTC AACGAGGTGT TCGGCAAGGA CCACGCCGAC
AGCTTCCTGC TGCTCGAATC GGGCCGTGCC GATGCCTTCG TGATGGACGG CCAGATCCTG
GCCGGCAACA TCGCCAAGAG CAAGGCGCCG GCCGATTTCA AGATCGTCGG CGAGGTGCTG
TCGGTCGAGC CGATCGCGAT CATGATGCGC AAGGATGACC CGGCTTTCAA GAAAGCCATC
GACGCCAGCC TGACCGCGAT GATGAAGTCC GGCGAGATCG CCAAGATCTA CGACAAGTGG
TTCATGCAGC CGATCCCGCC GTCGAATACG CGCGTGGGCC TGCCGGTGTC GGACGCCACC
AAGGCGGCCT GGACCAACCC CAACGACAAG CCCGCCGAGG ACTACGCCAA GAAGTGA
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| Protein sequence | MKKTLLVFAA LMAMGAAQAQ SDTLKKIKDS ASVTMGVRES SGALSLTLGD GKYVGYHVEL
CQRALADVQK LLGLPKLDIK YQAVTSQNRI PLVQNGTVDI ECGSTTNNAA RQKDVSFAVT
TYVEEVRIAV KGSSGITSIA QLGGKSVATT TGTTSVQLLR KHERANGVNF NEVFGKDHAD
SFLLLESGRA DAFVMDGQIL AGNIAKSKAP ADFKIVGEVL SVEPIAIMMR KDDPAFKKAI
DASLTAMMKS GEIAKIYDKW FMQPIPPSNT RVGLPVSDAT KAAWTNPNDK PAEDYAKK
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