| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3885 |
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| Symbol | |
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| ID | 6162335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4359790 |
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| End bp | 4360275 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666663 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792904 |
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| Protein GI | 171060555 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACC GCCGCCACGC CCCGCACGGC TTCACGCTGA TCGAGCTGCT GGTGACGGCC
ACGATCGTCG CGGTGCTCGC GTCGGTGGCG CTGCCGCTGG CCGAGCTGAG CGTCAAGCGC
GGCCGCGAGA ACGAGTTGCG CGCCGCTTTG CGCGAGATCC GCGGCGCCAT CGACGCCTAC
AAGCAGGCCA GCGACGACGG CCGCATCCTC AAGAAGGCCG ACGAGAGCGG CTATCCACCC
AACCTCGAAA TCCTGGTCGA GGGCGTCGAA GACGCGCGCA GCCCGAAGAA GACCCGCATC
CACTTCCTGC GCCGCCTGCC GCGCGACCCG CTGCATGCCG ATGCGCAGAC GCCGGCCGCG
ATGACCTGGG GCCTGCGCAG CTACGACAGC CCGCACGACG CGCCGCGCGA AGGCCGCGAC
GTCTACGACG TGCACACGCT GTCGAGCGGC AGCGCCATCA ACGGCCTGCC GTACAACCAG
TGGTGA
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| Protein sequence | MKHRRHAPHG FTLIELLVTA TIVAVLASVA LPLAELSVKR GRENELRAAL REIRGAIDAY
KQASDDGRIL KKADESGYPP NLEILVEGVE DARSPKKTRI HFLRRLPRDP LHADAQTPAA
MTWGLRSYDS PHDAPREGRD VYDVHTLSSG SAINGLPYNQ W
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