| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3869 |
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| Symbol | rplJ |
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| ID | 6161532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4343431 |
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| End bp | 4343979 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641666643 |
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| Product | 50S ribosomal protein L10 |
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| Protein accession | YP_001792888 |
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| Protein GI | 171060539 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0244] Ribosomal protein L10 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAGTCTCA ATCGCAACGA TAAAGCAGCG GTGGTGGCAG AGGTGGCGGC CCAGGTGGCT
CGCTCCCAGA CGCTCGCCCT GGCCGAGTAT CGTGGGCTCA CCGTCGCCGA CCTCGACAAG
CTGCGCCGCA CTGCGCGCGA GCAAGGTGTG TATCTTCACG TCCTGAAGAA CACCCTGGCT
CGCCGTGCAG TTGCCGGCAC CGCTTTCGAA TCGGCGGCCG AGTCCATGTC CGGCCCGCTG
ATCTATGGCT TCTCGGAAGA CGCCATTGCT GCAGCCAAGG TGGTTGTCGA CTTCGCCAAG
ACCAACGACA AGCTGGTCTT GAAGGGTGGT GCCTATGCAG GCAAGGCCCT CGACGTCAAC
GGCATCAAGG CTCTGGCATC GATTCCGAGC AAGGAAGTTC TGCTTGCCCA GTTTCTGGGA
CTGCTGCAGT CGCCGATCTC GCGCACCGCG CGTGTTCTGG CTGCACTGGC CGAGAAGCGT
GCCGTCCCGG CTGCCGAAGA GGCCGTCGAA GCGACTGCCG ACGTGGCAAC CGAAGCAGCC
GCAGGCTGA
|
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| Protein sequence | MSLNRNDKAA VVAEVAAQVA RSQTLALAEY RGLTVADLDK LRRTAREQGV YLHVLKNTLA
RRAVAGTAFE SAAESMSGPL IYGFSEDAIA AAKVVVDFAK TNDKLVLKGG AYAGKALDVN
GIKALASIPS KEVLLAQFLG LLQSPISRTA RVLAALAEKR AVPAAEEAVE ATADVATEAA
AG
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