| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3848 |
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| Symbol | |
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| ID | 6162623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4314882 |
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| End bp | 4316267 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666621 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792867 |
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| Protein GI | 171060518 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1432] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAAGTG CGCTTTTCGT CGATTTCGAC AACGTCTATT CCGGCCTGCG CAAGCTCGAT
CCGACCATCG CCGATCGTTT CTCGCGCCAG CCGCTGCGCT GGGTCGAATG GCTGCTGGAC
GACCTGCCGC CCCCCGAACA CGCCCCGGAC GGCGCCCGGC GCCGGCTGCT GGTGCGGCGG
GTCTACCTCA ATCCGCAGGT CTACCAGCGC TACCGCGCCG CCTTCAACCA CGCCGGCTTC
GAGATCATCG ACTGCCCGGC GATGACCAGC GAAGGCAAGA CCAGCACCGA CATCCACATG
GTGCTCGACA TGGTCGACCT GCTGCAGCAC CAGGTGCATT ACGACGAGTT CATCGTGTTT
TCGGCCGACG CCGACTTCAC CCCGGTGCTG CGCAAGCTGC GCCGCTGGGA TCGCCGCACC
ACGGTGCTGG CGGTGGGTTT CCCGTCGGCC GCCTACCGCG CCTCGGCCGA TCTGCTGATC
GACACCGACC TGTTCCTGCG CGATGCCATC GGCGTGCGCG AGGCCGAGGA TGTGGCGCCT
GCGGCCCCGT CGAACGGCTC GAATGGCTCG AACGGCACGC TCGTCCATGC GGCAGCGGCC
GGGGTGCCGA CGTCGGTGCA GGCCCCGGGG CCGACATCGG CGGGCGCGGG TCTCGACGAA
TCCGCCCCGG TGCTGTTCTC GCTGGCGGCC GCGTCGGTGC CCGAGCAGGC CGTGCTGGTC
GAGCGCATCC GCACCGAGGT CGCGCGTGCC GACCTGCCGG TGCCCTGCGC CCGGCTGGCC
TCGCGCCTGA TGGCCGAGTA CCCCGGCATC TCGCCCGACT GGTGCGGGCA GGGCGGCTTC
CGGCGTTTCC TCGAATCGCT GCCGCTCGAG CCGCTGGCGC TCGACTGGAG CGCCTCGGGC
GGCCACCTGT TCGACCCGGC GCGCCACACG CTGCGCCAGC CGTCGGCGCC GTTCGCGCAC
CGCACGGCGG TCGACGCGGT GAGCTGGGGG GTCGAACCGG CGATGCTGGC GCTGATCCGC
CAGGTCAACG AGATCACCGG CGTGCCGCTG CTGTCGCCGC GCGACTTCAG GGCGCTGTTC
GACGCGGTGG CCGCCGAGGT GGCCGAAAAC CCCTTCCAGC TCAACGAGAC CGGCAAGGCG
GTGCGGGACC GCTGCCGCGA AGCCGGCCGC GACATCAGCC GTGAAAACGT CAACTGGGTG
CTGCGCGGCC TGCTGCTGTG CGGCCACGAG TTCGGCCAGG GGCACGACGA CGTGCCGACG
CTGACCTACC GGCTGGTCGG CAACCTGATC AACCTGTGCC GGCGCGAGCA GGTCATGATG
GACGAGGGCG CGCCCGGCAT GCTGCAGCGC TGGATGAGCG GCAAGGTCGG CGAGTCGGGC
GGCTGA
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| Protein sequence | MKSALFVDFD NVYSGLRKLD PTIADRFSRQ PLRWVEWLLD DLPPPEHAPD GARRRLLVRR
VYLNPQVYQR YRAAFNHAGF EIIDCPAMTS EGKTSTDIHM VLDMVDLLQH QVHYDEFIVF
SADADFTPVL RKLRRWDRRT TVLAVGFPSA AYRASADLLI DTDLFLRDAI GVREAEDVAP
AAPSNGSNGS NGTLVHAAAA GVPTSVQAPG PTSAGAGLDE SAPVLFSLAA ASVPEQAVLV
ERIRTEVARA DLPVPCARLA SRLMAEYPGI SPDWCGQGGF RRFLESLPLE PLALDWSASG
GHLFDPARHT LRQPSAPFAH RTAVDAVSWG VEPAMLALIR QVNEITGVPL LSPRDFRALF
DAVAAEVAEN PFQLNETGKA VRDRCREAGR DISRENVNWV LRGLLLCGHE FGQGHDDVPT
LTYRLVGNLI NLCRREQVMM DEGAPGMLQR WMSGKVGESG G
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