Gene Lcho_3733 details

Gene Information

• Locus tag: Lcho_3733
• ID: 6163766
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 4175660
• End bp: 4176304
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 641666506
• Product: cytoplasmic chaperone TorD family protein
• Protein accession: YP_001792752
• Protein GI: 171060403
• COG category: [R] General function prediction only
• COG ID: [COG3381] Uncharacterized component of anaerobic dehydrogenases

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 42
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACTGAAG CCCCCGCCGC ACCGATCCAT TTCGCCGCCG TCCACGCGGG CGACGACAGC 
GACGAGCTCG CCCGCGCCGA GTTGTACGGC CTGCTCTCGC AGCTCTGGCT GGCGCCGCCG 
GACGCCACGC TGCTCGAACA GTTCCGCGTC GCCGTGACCG AGGCGCCGCA GGCCGGCGGC 
CTGCTCGAAG CGCCGTGGCA GGCGCTGGTG GCCGCGATGC GCGCCACCAG CGTCGAGGCC 
GCGGCGGCCG AGCACGAGGC GCTGTTCTAC GGCGTCGGCA AGCCGGAGGT GTTCGTCTAC 
GGCTCGTATT ACCTCAGCGG TTTCCTGCAC GAGCGCCCGC TCGCGGCGCT GCGCGAGTCG 
CTCGCCCAGC TCGGCCTGAC ACGCGATGCG CAGCGCGCCG AAACCGAAGA CCACGTCGCC 
TACGTGCTGG AGGTGATGCG GTATCTGATT GCCGGTGACG ACGCCGGCGT GTGCAACCTG 
GAACAGCAGC GGCGCTTCTT CCGGGCCCAT GTGCAGAGCT GGGTCGAGGC GCTGTGCGAG 
GCGGTGCTGG CGCATCCACG TGCCGAGCTG TGGCGCGCCG TGGCCGGCTT CACGCAGGCT 
TTCGTGCAAG TGGAAACGCA GGCTTTCGAC CTGCTGGAGA CATGA 

 

Protein sequence

MTEAPAAPIH FAAVHAGDDS DELARAELYG LLSQLWLAPP DATLLEQFRV AVTEAPQAGG 
LLEAPWQALV AAMRATSVEA AAAEHEALFY GVGKPEVFVY GSYYLSGFLH ERPLAALRES 
LAQLGLTRDA QRAETEDHVA YVLEVMRYLI AGDDAGVCNL EQQRRFFRAH VQSWVEALCE 
AVLAHPRAEL WRAVAGFTQA FVQVETQAFD LLET