| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3692 |
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| Symbol | |
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| ID | 6161090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4127862 |
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| End bp | 4128779 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666465 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001792711 |
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| Protein GI | 171060362 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCG ACCTCCTGGC CGCCACCGCG CGGCAGAACA TCGCCGATTT CGGCATGGAC
ACCATCTCGC TGGCCGGCCC GCTGGAGGCC CGGCTGGCGG CGGTCAAGGC CGCCGGCTTC
AGCCAGATCA TGCTGGCCGC GCGCGACATC GTCGGCCACC CGCAGGGCAT CGACGCCGCG
GTGGCCGCGG TGCGCGCCAG CGGCCTGCGC GTCACCGGCT TCCAGGTGCT GCGCGATTTC
GAGGGCTTGA GCGGCCACCT GCACGGCTAC AAGGTCGACA TCGCCAAGCA GATGATCCTG
ATGGCGCGCG CGCTGGGTGC CGAGGTGCTG CTGGCCTGCT CGTCGACCTC GGAGCACGCC
AGCGGCGAGG TCGACACCAT CGCCCGCGAC CTGCGCAAGC TCGCGATGCT GGCGCTGCCG
CACGGCATCC GCATCGCCTT CGAGGCGCTG TCGTGGGGCC GCCACCTCAA CGAATACACC
CACGCCTGGC AGGTGGTCGA GCGGGCCGAC TGCCCGAACC TCGGGCTGGC GATCGACTCG
TACCACGTCT TCGCCACCGG CACGCCGCTC GACGCGCTGG AGCGGGTCGA CCCGGCCAAG
ATCTACCTGG TGCAGCTGGC TGACTTCATG TGGCAGGAGC TGCGCACGCC GCAGGAGCGC
ATGGACACGG CGCGGCACTT CCGCGTCTTC CCGGGTGAAG GCGTGCATTC GCAGGCGCTG
ACCGCGCTGG TGCTCAAGCT CGACCAGCTC GGTTACCGCG GCGACTACAG CTTCGAGGTC
TTCAACGACG ACTACCAGCA GCTGCCGCTG CCCTACGTGG CCCAGCGCGC ACGCGATTCG
GCGCTGTGGC TGGCCGAGGG CGTGCTGCGC CGCTCGGTGC CGTTGCCGGG GCGGATGCGG
CTGCGCCAGC AGGGCTGA
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| Protein sequence | MTRDLLAATA RQNIADFGMD TISLAGPLEA RLAAVKAAGF SQIMLAARDI VGHPQGIDAA
VAAVRASGLR VTGFQVLRDF EGLSGHLHGY KVDIAKQMIL MARALGAEVL LACSSTSEHA
SGEVDTIARD LRKLAMLALP HGIRIAFEAL SWGRHLNEYT HAWQVVERAD CPNLGLAIDS
YHVFATGTPL DALERVDPAK IYLVQLADFM WQELRTPQER MDTARHFRVF PGEGVHSQAL
TALVLKLDQL GYRGDYSFEV FNDDYQQLPL PYVAQRARDS ALWLAEGVLR RSVPLPGRMR
LRQQG
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