| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3686 |
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| Symbol | |
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| ID | 6160459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4122164 |
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| End bp | 4123315 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641666459 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001792705 |
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| Protein GI | 171060356 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTCC CACGTCGCCA CATCAGCCTG GCTGTTGCCG CACTCGCACT CGCCACCGGC
GGCCTCGCGC AGGCGCAGAG CACGATCAAG ATCGCCGGCC TCTACGAGCT GTCGGGCGCA
GGCGCCAGCG CGGGCACCAA CTTCAAGAAC GGCGTCGACA TGGCGATCAA GGAGATCAAC
GCCGCCGGTG GCATCCTGGG CAAGAAGATC GAGCACGGCA TCAGCGACAC GCAGTCCAAC
CCCGGCGTCG CCAAGGGCCT GGCCGCCAAG GCGATCGACG ACGACGCGTT CGCGGTGTTC
GGTCCGGTGT TCTCGGGCTC GATCATGGTC AGCATGGCCG AGACCCAGCG CGCCGAGGTG
CCCAACTTCA CCGGCGGCGA GGCCGCTGCG ATCACGCAGA AGGGCAACCC GTACATCTTC
CGCACCAGCT TCACGCAGAC CACCGCGATG CCCAAGGTGG CGCGCTACAT CGCCCAGGGC
CTGAAGGCCA AGACGGTGGC GGTGCTGTTC GTCAACAACG ACTTCGGCAA GGGCGGCCGT
GACGCCATCA CCAAGGCCCT CGAGGCCCAA GGCGTGAAGG TGGTGGCCGA CATCTCGACC
GACAGCGGCC AGATCGACTT CTCGGCCCCG GTGCTGAAAG CCAAGCAGGC CAACGCCGAC
GCGCTGTTCG TCTACACCAA TGAAGAAGAG TCGGCGCGCG CGCTGCGCGA GCTGCGCAAG
CAGGGCTACA ACAAGCCGAT TGTCGGCGAG ACCACGCTGA CCGGCCAGAA GGTGATCGAG
CTCGCCGGTG ACGCCGCCAA CGGCGCCATC GCCCACGTCG GCCTGACGAT CGACGCGCCG
AACCCGCTGA TGCTCAAGTT CAAGGCCAAG TTCTACCAGG ACTACAAGTA CTTCTCCGAT
CACAACGGCA TCAAGGGCTA CACCGGCGTG TACATCATGA AGGCGGCGAT CGAGAAGGCC
GGCAAGCTCG ACCGCAAGGC GGTGGCCAGC GCGCTGCACG GCCTGAAGAT CTCGGCGGCC
AAGAACCCGG GCGTGATCAT GGACGTGAGC GTCGACAACA ACGGCGACCT CGACCGCGAG
AGCTTCCTGG TCGAGGTCAA GGACGGCAAG CAGGTCGTCA AGGAAACGCT GCCGGCGCTG
GGCGCCAAGT AA
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| Protein sequence | MNFPRRHISL AVAALALATG GLAQAQSTIK IAGLYELSGA GASAGTNFKN GVDMAIKEIN
AAGGILGKKI EHGISDTQSN PGVAKGLAAK AIDDDAFAVF GPVFSGSIMV SMAETQRAEV
PNFTGGEAAA ITQKGNPYIF RTSFTQTTAM PKVARYIAQG LKAKTVAVLF VNNDFGKGGR
DAITKALEAQ GVKVVADIST DSGQIDFSAP VLKAKQANAD ALFVYTNEEE SARALRELRK
QGYNKPIVGE TTLTGQKVIE LAGDAANGAI AHVGLTIDAP NPLMLKFKAK FYQDYKYFSD
HNGIKGYTGV YIMKAAIEKA GKLDRKAVAS ALHGLKISAA KNPGVIMDVS VDNNGDLDRE
SFLVEVKDGK QVVKETLPAL GAK
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