Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3533 |
Symbol | |
ID | 6161273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3951632 |
End bp | 3952126 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641666306 |
Product | putative ATP synthase protein I AtpI |
Protein accession | YP_001792552 |
Protein GI | 171060203 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0889946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACT CGTCTGACAT GAAGCAGTCG ACAACCGACT GGGGTGCAGA TGAGGACGGC GAAGCACCTT TCAAGAGTCT GACGCGCGAA GAGGCGTCGG CATTGAGAGC CCTGCATCCG TCACTGTCTC CGTGGCGGAT CGTTGCAGCC CAGGCTGTGG CGGGTCTGCT GGTCGTCGCG GTTGCGTGGT GGCTGGTCGG ATCGGTGGGA GTGACTGTGT CGGCGCTGTA CGGTGCCGCC GCGGTGGTTT TGCCAACGGC CTTGCTGGCT CATGGCATGA CCAGGCCTTA CGGCGCGGGG TCGGGTGCTG CGGCATTCAG CTTCGTGTTA TGGGAGTTCG TGAAAATCGG CTTGACCGTT GCCATGTTGG TGGCGGCAGC CTGGGTTGTG CCTGATCTCA GTTGGCCGGC ATTGCTGGTC AGCATGGTCG TGTGCATGAA GGTGAACTGG CTGGCCCTGC TTTGGCGGGG TCGGGTGACG ACAACTCGGT CCTGA
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Protein sequence | MSDSSDMKQS TTDWGADEDG EAPFKSLTRE EASALRALHP SLSPWRIVAA QAVAGLLVVA VAWWLVGSVG VTVSALYGAA AVVLPTALLA HGMTRPYGAG SGAAAFSFVL WEFVKIGLTV AMLVAAAWVV PDLSWPALLV SMVVCMKVNW LALLWRGRVT TTRS
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