| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3444 |
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| Symbol | |
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| ID | 6160277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3846534 |
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| End bp | 3847928 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666219 |
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| Product | histidine kinase |
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| Protein accession | YP_001792467 |
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| Protein GI | 171060118 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.032757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAGA CCGGCAGAAA GAACAGCCTC GAACGGCTGC TGCGACATCG GCTGCTGCTG
CTGATCGGCG GACTGTGGGT TGCGGCATCG GTGGTAGTCT GGTACGGACT GCGTTCGCAG
ACCAATGCCC TGCTCGACCT GATCCTGCTC GAAACCGCCG AGCAGCTGAT GGTGATGCCC
GACGAGGCGC TCGGCGATGG CAGCTCGCCG CCGCGGGTGA TCGAGATCGG CACCGACGAG
GCCGACATCG TCTATCAGGT CTACGACGGC AACGGCCGCC TGCGCCTGCG CTCCCACGCC
GCGCCGACCA CGCCCATGAT CGCCGTGCAG CAGGATGGCC GGATCGAGAC CGACCGCTGG
TACCTCTTCA GCCTGACCCA TCCGGATCGG TCGCGCCGGG TCCTGATCGG CGAGTCGCAG
TCGCACCGCA ACGGCGCACT CTGGGACCTC AACGCCTGGC TGATCGCACC GCTGGTGGTG
CTGCTGCCGC TGATGGCGCT GGTCTTGACG CGCGTGTTGC GGCAATCGTT CCTGACGCTC
GAGCCGGTGC GGGACAACCT CGACCGGCGC GCCCCGCATG AGCTGCATGC GGTCGACGTG
TCGGCTGCAC CGCTCGAACT GCAACCGATG CTCGAGACCG TCAACCGGAT GATGGCGCGG
GTGAGTTCGC TGGTGGAGGC CGAGCGGGCC TTCGCCGCCC ACACCGCCCA CGAGCTGCGC
ACGCCGCTGG CGGCCGCGCG GGCGCAGGCA CAGCGCCTGG CCGTCGAGGC GAACGAGCAC
GGCACGCCGC AGCTGGTCGA ACGGGCGCTG GCCCTGATGC GCCAGCTCGA TCGCCTGACG
CGGCTGGCGA GCCGGCTGCT GCAGCTGGCG CGGGTGGATT CGGGGGTCGC ACTCAAGCGC
ACGGACGTCG ATCTGCGCCA GCTCGCCGAG CTGGTGACCG ACGAGTTCGG CGACGCGCGC
GCCCAGGGTT TCCTGCTGCC GACCGAAAAC ACCGACGGCG CACACGAAGA GGTGTCCGGC
GACGTCGACG CCCTGGGCAT CGCCCTGCGC AACCTGATCG ACAACGCCCT GAAGCACGGC
GGCGAGCAGC CTCGCGTGCG GGTCTGTGTC GGCCATCGCC GGCTGGCGGT GCAGGACTGC
GGCCCGGGCA TCGCCGCCGA CGAGCTGCAG CGTCTGGCCA AGCCGTTCGA ACGCGGCCCC
ACGGTGGCCG AAGGATCGGG GCTGGGGCTC ACGATGGTCC AGACCGTCGC CCGCCAGTCC
GGCGCGACGC TGGATTTCAC GTCACTCGAC GGCGTCGCGG GCGGCTGGCG CTTCGAAGTC
AGCCTGTACT TCCCCGAGGG CGCCCAGGCC GAGGAGGCAG CCGCCGCCCG GCAGGATCCG
CCCGGCGGCG GCTGA
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| Protein sequence | MSETGRKNSL ERLLRHRLLL LIGGLWVAAS VVVWYGLRSQ TNALLDLILL ETAEQLMVMP
DEALGDGSSP PRVIEIGTDE ADIVYQVYDG NGRLRLRSHA APTTPMIAVQ QDGRIETDRW
YLFSLTHPDR SRRVLIGESQ SHRNGALWDL NAWLIAPLVV LLPLMALVLT RVLRQSFLTL
EPVRDNLDRR APHELHAVDV SAAPLELQPM LETVNRMMAR VSSLVEAERA FAAHTAHELR
TPLAAARAQA QRLAVEANEH GTPQLVERAL ALMRQLDRLT RLASRLLQLA RVDSGVALKR
TDVDLRQLAE LVTDEFGDAR AQGFLLPTEN TDGAHEEVSG DVDALGIALR NLIDNALKHG
GEQPRVRVCV GHRRLAVQDC GPGIAADELQ RLAKPFERGP TVAEGSGLGL TMVQTVARQS
GATLDFTSLD GVAGGWRFEV SLYFPEGAQA EEAAAARQDP PGGG
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