| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3402 |
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| Symbol | |
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| ID | 6162834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3783635 |
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| End bp | 3785323 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641666177 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792425 |
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| Protein GI | 171060076 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.677203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGA AAAATTTGGT GAAGATGTGT GGCTGCGTTC TGGCTTCTGT GCTGCTGATC
GCGTGTGGCG GTGGCGGTGG GGATGCCGGC AGTACTCCGT TCACTCCACC GACGTCCGGA
GGAACGGATG CGACCGCGAG TGCGACCGCA GCAGATTTAC TGGTGTCGCT GAGCAACACC
AGTTTGAGTA ATTCAGGCAC AAACACGGTC TCTGTAACAG TGACGGCAGT CAATGCCTCA
CGGGTAGCCG TGGCCAATGT GCCTGTGACC ATTTCGGTTG ATAACAATGC CGTGGCAGTT
GTCGGTGGCA GCGCCACTGG TGCGGATGGA AAACTCACTG CGACGGTTCA GACCGGCACG
GATCGATCGA ACCGCATCGT CACGGTTACG GCTACGAGCG GCAGCATTAG CAAGTCTGCG
TCGTTTTTCA TTATCGGCTC CAAGATCGAC GCGAGTGTTT TGCAGGCCGT GTTGGCACCG
GGTGCAAGTG GACAGATCCA ATACCGGCTA ACCGATGTCA ACAGCAATCC GATGGTCGGG
CTACCTATCG TTGTGACGGG CCCCGGCATC ACGTCGGCCT CGGCAACGAC AGATGCCAAC
GGTTCCTATG CCTTCAACTA TGTGGCACCG ACAACGGCAG GCAATCTGAC CATCACGGCC
AATGCGGGCG GGGTGACGTC GGTGCAGACC GTGATTGTCC AATCCGGAGT TGGCACGATT
CCGGCTGTTT CGACGCCGAT CTTGTCAGCT GACGTCAAGG CCAATCCCAG TGTCGTGTCG
GTCAACAGTA CGTCGTCCAA CAACCGCTCC GAGGTCAGGG CGCAGTTCCT CGGCGCAGGC
AATGCCCCGC TTGCCAACGT CAGAGTGCGG TTCGACCTGA ACGGTGACGT GAACAGCATT
GGCGGAACGC TGTCCTCAGG TAGCAATGTG GTCTATTCCG ACGTGAACGG CTTGGCTACG
ACGTCCTACA TCCCCGGTGC GCGACAGAGT CCGACTGACG GCGTGACAAT ACGAGCTTGC
TACTACGTCA ACGACAGCGA CGCGTCGGCG GGTGCTTGCG CGGCGTCGGC CATCACGCAA
TTGACGGTCA ATTCGGAACC GCTTGCGATT TCCATTGGCA CTGATAACAC CATTTCCGAC
GGGGCGGGTG GTCTCGCCTA CATCAAGAAA TACGTTGTAT TGGTCGTTGA TTCAGCCGGC
CAAGCAAAGG CCGGTGTGCA GATTACCCCA TCGATCGACT TGGTTTCCTA TGCCAAAGGC
TTTTATGTCA ATCCTGGGGC ATGGACACGC TCGACGGGTG CCGGGGGTTA TTTGTCGGCT
TCATGTATCA ATGAGGACGT CAATCGCAAT GGTGTGCTCG AAACAGGTGA GGATGTCAAC
GGCAATTTGC AACTGGATCC TCGTAAGTCA GATGTTGCCA TCAGCATGAT CGGTACAGGC
ATCACCGATA GCAGCGGGGT CGCGACTTTG CAGATCCTCT ATCCGAAGAA CGTTGCAACG
TGGGTCGACT ACAAGATTCT GGTCACCGCT GGTGTATCGG GCACTGAAGG ACGTGCCACG
TGGAGCGACA CGCTCGGGGC CGCAGCGTCT GAATTCACAG CGGAGACGCC CCCCTCATTT
GTAGTCAGTC CATATGGTGC TGGTGATCCA AGTCGTACGG CTGTTGAGGA ATGTACGGTA
GCAAATTGA
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| Protein sequence | MRLKNLVKMC GCVLASVLLI ACGGGGGDAG STPFTPPTSG GTDATASATA ADLLVSLSNT
SLSNSGTNTV SVTVTAVNAS RVAVANVPVT ISVDNNAVAV VGGSATGADG KLTATVQTGT
DRSNRIVTVT ATSGSISKSA SFFIIGSKID ASVLQAVLAP GASGQIQYRL TDVNSNPMVG
LPIVVTGPGI TSASATTDAN GSYAFNYVAP TTAGNLTITA NAGGVTSVQT VIVQSGVGTI
PAVSTPILSA DVKANPSVVS VNSTSSNNRS EVRAQFLGAG NAPLANVRVR FDLNGDVNSI
GGTLSSGSNV VYSDVNGLAT TSYIPGARQS PTDGVTIRAC YYVNDSDASA GACAASAITQ
LTVNSEPLAI SIGTDNTISD GAGGLAYIKK YVVLVVDSAG QAKAGVQITP SIDLVSYAKG
FYVNPGAWTR STGAGGYLSA SCINEDVNRN GVLETGEDVN GNLQLDPRKS DVAISMIGTG
ITDSSGVATL QILYPKNVAT WVDYKILVTA GVSGTEGRAT WSDTLGAAAS EFTAETPPSF
VVSPYGAGDP SRTAVEECTV AN
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