| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3397 |
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| Symbol | |
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| ID | 6163214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3778713 |
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| End bp | 3779426 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666172 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792420 |
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| Protein GI | 171060071 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1943] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGCC TGCCCCGCCT CGCTCTCGCC GGCATGCCGC ACCACGTGCT GCAGCGCGGC
CATCACCACC AGCCGGTCTT TGTCGACGAC GACGACCGCC GCGCCTATCT GCAGGCCTTG
CAGGAGGCGG CTGCCAACCT GCGCGTGGCC GTGCACGCCT ACGTGCTGCT CGACGATCAG
GTGCAGCTGC TGCTGACGCC GCCGAGTGCG CAGGCGCTGA GCCGCCTGAT GCAGGCGGTC
GGCCGGCGCT ACGTGAGTGC CTACAACCGC CGCCACCAGC GCGCCGGCAC CTTGTGGGAC
GGCCGGTTCC GGGCCGCGGT GCTCGACGAG CAGAGTCACC TGCTGGCTTG CGCGCGGGCG
ATCGAGCAGA GCCCGCAAGT CGCCGGCCGG GTGGGCCGGG CGATCGACTG GCCGTGGTCG
AGCGCCGCCC ACCATGTCGG CAGCCGGCGT GATCCGCTGC TGACGGTGCA TCGGCGCTAC
TGGGCGCTCG GCAATACCCC TTTCGAGCGC GAACTCGCCT GGCAGCGCCT GCTCGACGAG
CCGCTGCCCG CGGCATCGCG GCAACAGATC GTCCACGCCG TCAATCAGGG CTGGGCGATC
GGATCGGGTG CATTTCTTGC CTCGATGGCC CATTCGACCG CGCGTCCCTT GGCCCCCAGG
CCTCGGGGCC GCCCGCCCGG CGCACCGAAG CGGGACAAGT TGCCGGCTGC GTGA
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| Protein sequence | MARLPRLALA GMPHHVLQRG HHHQPVFVDD DDRRAYLQAL QEAAANLRVA VHAYVLLDDQ
VQLLLTPPSA QALSRLMQAV GRRYVSAYNR RHQRAGTLWD GRFRAAVLDE QSHLLACARA
IEQSPQVAGR VGRAIDWPWS SAAHHVGSRR DPLLTVHRRY WALGNTPFER ELAWQRLLDE
PLPAASRQQI VHAVNQGWAI GSGAFLASMA HSTARPLAPR PRGRPPGAPK RDKLPAA
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