| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3356 |
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| Symbol | |
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| ID | 6160334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3732337 |
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| End bp | 3733281 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641666131 |
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| Product | catechol 2,3 dioxygenase |
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| Protein accession | YP_001792379 |
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| Protein GI | 171060030 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03211] catechol 2,3 dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGTAA TGCGTATTGG CCATGCGAGC CTGCGGGTGA TGGACATGGC GGCTGCCGTG
AAACATTACG AAAACGTGCT GGGCCTGAAG ACGACGATGG TCGACAAGGC CGGCAACGTC
TATCTCAAGT GCTGGGACGA GTGGGACAAG TACTCGCTGA TCCTGACCCC GTCGGACCAG
GCGGGGCTCA ATCACGTCGC CTACAAGGTC GAGAAGGATG CCGATCTCGA CGAGCTGAAA
ACCAAGGTCG AGGCCTGGGG CGTCAAGACC ACGCTGCTGC CCGAAGGCAC GCTGCCGTCG
ACCGGCCGCA TGCTGCAGTT CAATCTGCCC AGCGGCCACG AGATGCGGCT GTATGCGATG
AAGGAATACG TGGGCACCGA GGTCGGCACC ACCAACCCCG ACCCCTGGCC CGATGGCCTG
AAGGGCGCCG GCGCGCACTG GCTCGACCAC CTGTTGCTGA TGTGCGAGAT GAACCCGCCC
GAGGGCATCA ACACCGTGGC CGACAACACC CGCTTCATGA CCGAGGCGCT CGACTTCTTC
CTGACCGAGC AGGTGCTGGT CGGCCCGAAC GGCGACATGC AGGCGGCCAC CTGGCTGAGC
CGCACCACCA CGCCGCACGA CATCGCCTTT GTCGGCGGCC CGAAGAGCGG GCTGCACCAC
ATCGCCTATT TCCTCGACTC GTGGCACGAC GTGCTGAAGG CCGCCGACGT GATGGCCAAG
AACAAGACCA AGATCGACGT GGCGCCCACC CGCCACGGCA TCACGCGCGG CGAGACGATC
TACTTTTTCG ACCCGAGCGG CAACCGCAAC GAAACCTTCG CCGGCCTGGG CTACCTGGCG
CAGCGCGACC GGCCGGTGAC GACCTGGACC GAAGACCAGC TCGGCAGCGG GATCTTCTAT
CACACGGGTG AACTGGTGGC CTCGTTCACC GAGGTCTACA CCTGA
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| Protein sequence | MGVMRIGHAS LRVMDMAAAV KHYENVLGLK TTMVDKAGNV YLKCWDEWDK YSLILTPSDQ
AGLNHVAYKV EKDADLDELK TKVEAWGVKT TLLPEGTLPS TGRMLQFNLP SGHEMRLYAM
KEYVGTEVGT TNPDPWPDGL KGAGAHWLDH LLLMCEMNPP EGINTVADNT RFMTEALDFF
LTEQVLVGPN GDMQAATWLS RTTTPHDIAF VGGPKSGLHH IAYFLDSWHD VLKAADVMAK
NKTKIDVAPT RHGITRGETI YFFDPSGNRN ETFAGLGYLA QRDRPVTTWT EDQLGSGIFY
HTGELVASFT EVYT
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