| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3224 |
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| Symbol | |
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| ID | 6161982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3575000 |
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| End bp | 3576253 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665998 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_001792247 |
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| Protein GI | 171059898 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGGC TCGAACCCGT GGCCGAGATC CTGCACATCA GCCCCTGGCC GCCTGATCCG
GGCGGTCTGT TCTGGCCGGT GCTGATGCTG CTCAGCGGCG GACTGCTCGG CGAGGTGGTG
GCGCGCGTGT CGCGCCTGCC GCGGGTGCTG GGCTATTCGA CCGCCGGCGT GGTGATCGCG
CTGTCGGGCA ACGGCACCAG CACCGGCCAG CTGCCCGAAT CGCTGCGCCT GGTGGTCGAC
GTGGCGCTGG CGCTGCTGCT GTTCGAGATC GGCAGCCGCG TCAAGCTGCG CTGGCTGCGG
GTCAACCAGG CCTTGCTGTG GACCAGCCTG AGCGAAGCCA CGCTGACCTT CTTCACGGTC
TATGCGGCGT TGTCGTGGTT CGGTCTCGAC CGGCCGCTGG CGATGGCCTG CGCGGTGCTG
GCGATGCCGG CCTCGGCGGC GGTGGCCGGG CGGGTGGCGC TCGAACTGGG CGCGGCCGGC
CAGGTGACCG AACGCATGAT CCTGCTGACC GCGCTCAACA CGCTCTATGC CACGCTGGCG
CTGACGCTGT TTCGCGGCTG GCTGTCGTTC GAACAGATGA GCGACTGGGT CAACGCCTTC
GCGCGCCTGG GCTACAACTT CCTCGGCTCG CTGCTGGTGG CGCTGCTGCT GGCGCGGCTG
GTGGCGCTGA TCGCGCGCCG GCTCGACCTG CGCAACGACA ACTCGGTGCT GCTGCTGCTC
GGCCTGGTGC TGCTGGCGAT CACGCTGGCG CGCTCGCTGG GGCTGTCGAC GCTGCTGGTG
CCGCTGCTGG CCGGGCTGGC GCTGCGCAAT TCGAGCGAGC GGCCCTGGGT CTGGCCGCGC
CACTTCGGCA CCGCCGGCGG GGTGCTGGTG CTGATGCTGT TCGTGATCGT CGGTTCGGCC
TGGTCGATCG AGACGCTGGC CGCCGGCGCC GCGGCGGCCG CGGTGCTGGT GCTGGCGCGC
GCGGCGGCCA AGCTGCTGGC GGTCAACGGC TGGGCCCGTG TCAGCGGCCT GAGCGGCAAG
CAGGGCCTGG CGCTGGGGAT CACGCTGACG CCACTGTCGG CCACCGCGCT GGTGATGCTG
GCCGATCTGT ATTCGGTCGA CCCGGCCTTC GGCCGCCAGC TCGCACCGAT CGTGCTGAGT
GCGATCGCGA TGCTCGAACT GCTCGGCCCG CTGGCGGTGC AATGGGCGCT GCAAAGCGCC
GGTGAAGTCA CGCCGGGCGC CTTGCAGGCC CGCAGCAAGG GGGCGCGCTC ATGA
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| Protein sequence | MEWLEPVAEI LHISPWPPDP GGLFWPVLML LSGGLLGEVV ARVSRLPRVL GYSTAGVVIA
LSGNGTSTGQ LPESLRLVVD VALALLLFEI GSRVKLRWLR VNQALLWTSL SEATLTFFTV
YAALSWFGLD RPLAMACAVL AMPASAAVAG RVALELGAAG QVTERMILLT ALNTLYATLA
LTLFRGWLSF EQMSDWVNAF ARLGYNFLGS LLVALLLARL VALIARRLDL RNDNSVLLLL
GLVLLAITLA RSLGLSTLLV PLLAGLALRN SSERPWVWPR HFGTAGGVLV LMLFVIVGSA
WSIETLAAGA AAAAVLVLAR AAAKLLAVNG WARVSGLSGK QGLALGITLT PLSATALVML
ADLYSVDPAF GRQLAPIVLS AIAMLELLGP LAVQWALQSA GEVTPGALQA RSKGARS
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