Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3212 |
Symbol | |
ID | 6161613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3556092 |
End bp | 3557474 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641665986 |
Product | coenzyme F390 synthetase-like protein |
Protein accession | YP_001792235 |
Protein GI | 171059886 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1541] Coenzyme F390 synthetase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGGCCCT ACACCGATCC CCGCAGCAGC GGCGCCATGG CCTTCGACGC CTGGATGGCG CCACGTGACA GCGCCGGCGC GCTGGTGCGG CGACAACGCC AGCGGCTGGA GGCGCTCTTC AAGGCGGCCG GCGCGTCGGC CTTCTACCGC CGGCGCTTCG AGCGCCACGG CGCGACGCTG GAGGCGCAGC CGAGCGTGGG CAAGCAGACG CTGATGGATC ACTTCGGCGA CTGGGTCTGC GACCGCCGCC TGAGCCTGTC GGCACTGCGG GACTTCATCG CCGACCCGGC CCGCATCGGA CTGGCCTTTG CGGGCGAGTT CTCGGTGTGG GAAAGCTCGG GCAGCAGCGG CGTGCCGGCG ATCTTCGTGC AGGACAGCGC CGCGATGGCG ATCTACGACA CGCTCGAAGC CCTGCGCCGC CCGGGCGGGC CATCGTGGCA GCGCTGGATG GACCCGTTCT GCCTGAGCGA GCGCATGGCC TTCGTCGGCG CCACCAGCGG CCACTTCGCC AGCACGGTGT CGGTCGAACG GCTGCGCCGC GTCATGCCCG GCATGGCGCA GCGGCTGCGC GGCTTCGACT TCCTCGATCC GACGCCGGTG CTGGTGGACG CGCTCAACCG GTGGCGGCCG AGCGTGCTGG CCACCTACCC GTCAGCCGCG CTGCTGCTGG CCGAGGAGGC GGCCGCCGGC CGGCTGCAGA TCGCCCCGCG CGAGATCCTG ACCGGCGGCG AGGCGCTCAG CGACGCCGTG CGGGAGATCG TCTCGCGCCA GTTCGGCTGC CCGGTGCGCG CGAGCTACGG TGCCTCCGAG TTCCTGACGC TGGGCACCGA GTGCGCGCAC GGGCACCTGC ATCTCAACAG CGACTGGGTG CTGCTCGAGC CGGTCGATCT CGACGGCCGA CCGGTGCCCG CGGGCGAGCC CGGCGCCACC ACGCTGCTGA CCAATCTGGC CAACCACGTG CAGCCGCTGA TCCGCTACGA CCTCGGCGAC CGCGTGTGTT TCGACCCCGC GCCCTGCACC TGCGGCAGCA GGCTGCCGGT GATCGCCGTG CAGGGCCGCG TCGACGACAG CCTGCTGCTG CCCGACACCC GCGGCTGCAG CGTGCGGCTG CTGCCGCTGG CGCTGACCAC CGTGCTCGAG GACGACGCCG GGGTGTTCGA CTTCCAGCTG GTCCAGCAGG ACGGTCACAG CCTGTCGCTG ACGATCGCCG AATCGGGCGA CCGCGCCGCG CTGCTGCACG TGCGCCGGGT GCTGCTGGAC TACCTGCGGC AGCAGGGTGT CGATGCGGTC GAACTGCACG TGCACCGCGG CGAGCCGGCG GTGCACGGGC GCAGCGGCAA GCGCCCGCGG GTGGTCGCGC TGCACGCGAC GACCACGCCC TGA
|
Protein sequence | MWPYTDPRSS GAMAFDAWMA PRDSAGALVR RQRQRLEALF KAAGASAFYR RRFERHGATL EAQPSVGKQT LMDHFGDWVC DRRLSLSALR DFIADPARIG LAFAGEFSVW ESSGSSGVPA IFVQDSAAMA IYDTLEALRR PGGPSWQRWM DPFCLSERMA FVGATSGHFA STVSVERLRR VMPGMAQRLR GFDFLDPTPV LVDALNRWRP SVLATYPSAA LLLAEEAAAG RLQIAPREIL TGGEALSDAV REIVSRQFGC PVRASYGASE FLTLGTECAH GHLHLNSDWV LLEPVDLDGR PVPAGEPGAT TLLTNLANHV QPLIRYDLGD RVCFDPAPCT CGSRLPVIAV QGRVDDSLLL PDTRGCSVRL LPLALTTVLE DDAGVFDFQL VQQDGHSLSL TIAESGDRAA LLHVRRVLLD YLRQQGVDAV ELHVHRGEPA VHGRSGKRPR VVALHATTTP
|
| |