| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3178 |
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| Symbol | |
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| ID | 6161600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3512796 |
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| End bp | 3513782 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665953 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792202 |
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| Protein GI | 171059853 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000137109 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAGCA TTCACACCCT CACCCGCCGT CGCATGGTCC AGGCCATCGC ACTGACCCTG
GCCGTGTCCG GCGGCAGCGC CATGGCGCAA GCCTGGCCGG CCAAGCCGAT CACGCTGATC
GTGCCCTTCC CGGCCGGTGG CACCACCGAC GTGCTGGCCC GCGCACTGGG CGAGAAGCTG
CAGCAGAGCC TGGGCCAGCC GGTGATCGTG GAGAACAAGC CCGGCGCCGG TGCCACGCTC
GGCGCCGACT ACGTCGCCAA GTCCAAGCCC GACGGCTACA CGCTGCTGAT GGGCGCGGTG
CACCACACCA TCGCGCCGGC GGTCTACAAG AAGATGGCCT ACGACTTCCA GAAGGACTTT
GCGCCGATCA CCACGGTCGC ACTGGTGCCC AACGTGCTGG TGGTCAATGC CGCAACGCCG
GCCAGGAACG TGGCCGAACT GGTCGCGCTG GCCAAGGCCA AACCGGGTGA GTCGACCTAC
GGCTCCAACG GCAACGGCAC GGCGCAGCAC CTGATCGGCA CCCAGTTCCA GAACCTCACC
GGCGCCGACC TGGTGCACGT GCCCTACAAG GGCAGCGGCC CACTCGCCAC CGACCTGCTG
GGTGGCCAGA TCACGATGTC GTTCGACACC ATCACGCCGG TGCTGCCGCA CATCAAGAGC
GGCAAGCTGC GTGCGCTGGC GGTGACCACG AGCAAGCGCT CGGCCGCGCT GCCGGATGTG
CCGACGCTCG ACGAAGCGGG CCTCAAGGGC TTCAACATCG GCACCTGGTT CGGCGTGCTG
GCGCCGGTGG CCACGCCCAA GGAGGTCGTG GCACGGCTCA ACGCCGAGAT GGTCAAGGTG
ATCCAGTCGG CCGACTTCCG CAAGCGCATG GACGAGATCG GCGCCGAGCC GATCGGCAAC
AGCGCCGAGC AGATGGCCCA GCAGATCAGG GGCGAGACCG AGAAGTTCGC CAAGCTGGTC
AAGGATGCGA AGGTGACGAT CGAGTGA
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| Protein sequence | MSSIHTLTRR RMVQAIALTL AVSGGSAMAQ AWPAKPITLI VPFPAGGTTD VLARALGEKL
QQSLGQPVIV ENKPGAGATL GADYVAKSKP DGYTLLMGAV HHTIAPAVYK KMAYDFQKDF
APITTVALVP NVLVVNAATP ARNVAELVAL AKAKPGESTY GSNGNGTAQH LIGTQFQNLT
GADLVHVPYK GSGPLATDLL GGQITMSFDT ITPVLPHIKS GKLRALAVTT SKRSAALPDV
PTLDEAGLKG FNIGTWFGVL APVATPKEVV ARLNAEMVKV IQSADFRKRM DEIGAEPIGN
SAEQMAQQIR GETEKFAKLV KDAKVTIE
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