Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3177 |
Symbol | |
ID | 6161599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3511408 |
End bp | 3512694 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641665952 |
Product | hydroxypyruvate reductase |
Protein accession | YP_001792201 |
Protein GI | 171059852 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2379] Putative glycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.000791929 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAAACAC CCGACCCACG CAGCCTGCTG CGCCACCTGT TCGATGCCGC GATTGCCGCC GCGCAACCGG CGCTGTGCGG GCCTCGCCAC CTGCCGGCTG CGCCCAAGGG CCGGCTGGTC GTGATCGGCG CCGGCAAGGC CTCGGCCGCG ATGGCGCGTG CGGTCGAACA GCATTGGCCC GGCCCGCTCT CGGGCCTGGT CGTGACGCGC TACGGCTACG CCGTGCCGTG CGAGCGCATC GAGATCGTCG AGGCCGCGCA CCCGGTGCCT GACGCGGCTG GCGAGGCCGC CGCCAAGCGC CTGCTGCAAC TCGTGCAAGG GCTCACCGCC GACGACCTCG TGCTGTGCCT GATCTCGGGC GGCGGCTCCT CGTTGCTGCC GCTCGCCTTG CCGGGCCTGA CGCTGGCCGA CAAGCAGGCG CTCAACCGCG CCCTGCTGGC CAGCGGCGCC AGCATCAGCG AGATGAACTG CGTGCGCCGC CACCTGTCGG CCATCAAGGG CGGGCGCCTG GCCGCCGCCT GCCATCCGGC GCGGGTGGTG AATCTGCTGC TGTCGGACGT GCCGGGCGAC GACCCCATCG ACATCGCCTC CGGCCCGACC GTGCCCGACC CGAGCACCTG CGCCGACGCG CTCGCCATCC TGCGCCGCTA CGCGATCGAG GTGCCGCCGC GGGTGCGCGC CCTGCTCGAA AGCGGCGAAG GTGAATCGAT CAAACCCGGC GACCCGCGCC TGCCGGCGAT CGAGACCCGT TTCGTCGCCA CGCCGCAGAT GGCGCTCGAA GCCGCAGCGG CCGTGGCGCG CGATGCCGGC TACGACGCGC ACATTCTGGG CGATGCGATC GAAGGCGAAG CCCGTGACGT CGCCAAGACG CTGGCCGGCA TCGCGCGGCA GGTGGCGCGC CGCGGCCAGC CTTTTCAGGG CCCGTGCGTG CTGCTGTCCG GCGGCGAGAC CACCGTCACG CTGCGTGGCC AGGGCCGCGG CGGGCGCAAC GTCGAGTTCC TGCTGGCGCT GGCCGTGGCA CTGAACGGCG AACCCGGCAT CCACGCGCTG GCCGGCGACA CCGACGGCGT CGACGGCCAG GACGAGATGG CCGGCGCGCT GCTCGCCCCC GACACGCTCG AACGCGCCTG GGCGCTCGGC CTGCGCCCGC GTGAACGCCT CGATGACAAC GACGGCCACG GCTTCTTCGA GGCGCTCGGC GACTCGATCG TGACCGGCCC GACGCTGACC AACGTGAACG ACTTCCGGGC CATCGTCATT GCGGCCGGCC TGCCATCCCA CTGTTGA
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Protein sequence | MKTPDPRSLL RHLFDAAIAA AQPALCGPRH LPAAPKGRLV VIGAGKASAA MARAVEQHWP GPLSGLVVTR YGYAVPCERI EIVEAAHPVP DAAGEAAAKR LLQLVQGLTA DDLVLCLISG GGSSLLPLAL PGLTLADKQA LNRALLASGA SISEMNCVRR HLSAIKGGRL AAACHPARVV NLLLSDVPGD DPIDIASGPT VPDPSTCADA LAILRRYAIE VPPRVRALLE SGEGESIKPG DPRLPAIETR FVATPQMALE AAAAVARDAG YDAHILGDAI EGEARDVAKT LAGIARQVAR RGQPFQGPCV LLSGGETTVT LRGQGRGGRN VEFLLALAVA LNGEPGIHAL AGDTDGVDGQ DEMAGALLAP DTLERAWALG LRPRERLDDN DGHGFFEALG DSIVTGPTLT NVNDFRAIVI AAGLPSHC
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