Gene Lcho_2804 details

Gene Information

• Locus tag: Lcho_2804
• ID: 6161918
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 3088245
• End bp: 3090041
• Gene Length: 1797 bp
• Protein Length: 598 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 641665582
• Product: serine/threonine protein kinase
• Protein accession: YP_001791834
• Protein GI: 171059485
• COG category: [K] Transcription; [L] Replication, recombination and repair; [R] General function prediction only; [T] Signal transduction mechanisms
• COG ID: [COG0515] Serine/threonine protein kinase; [COG1639] Predicted signal transduction protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 0.584484
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGTTTG AATCAGGCCA GTCCCATTCG AGTCCGGATT TGATCAGCGT GTCCGCCAAC 
GCATCCACCG CTGCCCATGG TCACAACGCC GCCGCCGGAA TTGCCGGCCT GCGCAGCTTC 
GGCCGCTTTG CGCTCAGGCA GCTGATCGGC CGCAGCTCGC TGTCGATGGC CTGGATCGCG 
CACGACACGC GCAGCCGTCG CGACGTGCTG CTGCTGATCG CGCGCCAGGC GATCGAGGAG 
CGCCGGCAGC TTGCGGAGGC GGTCGATGCC ATGCGGCGTG CGGCGCGGCT GGAGCACCCC 
CGTCTGCTGC CGGCCATCGA GACCGGCGAG CGCGACGCCT GGCCCTACCT CGTGTGCGAG 
GCCCCACAGG GGGTCCAGAC GCTCTCGCAG TTCCTGGCGG GTCGGCCAGC TCCGCCGCCG 
CTTGAAGCTG CCGGCTGGGC CGTCGACGCG CTCGAAGGAT TGGCCTACCT CCATGACGCC 
GGCCTTGCGC ACGGCGATGT CGGCCTGCAC AGCCTGCTGC TCGACAAGAA CGGTCGCCTG 
CTCGTGTGGG GCGCCAACCT GCGAGCTGAC GTTCAAGGTG TCACGTCCGG CGAGTTCGAG 
TCGGATCTCC TTCGCCAGCA GCGTGCCGCC GGAGAGCGCG ACGTTCTGGC GATCGGTCTG 
CTGCTCTACC AGTGGGTCGC ACACAGCGCA GCGTTCGACG AACGGGACAT GCCCACCGCC 
ATTGCCCGCC TGGGGCAGGA CATCGTGCGA TTGCCCTGGG CCTTGCCGCA GCCGGTGCCG 
GACGCGCTGA GGGCGATCAT CAACCGGGCG ACCGACCGGC ATGCGCATCG CCGCTACCTC 
GGTGCACGCA GCCTCGAGCG GGCGCTGTCG GGCTGGTGCC GGGTGCAGGC CAGCGACCGC 
GGCGGCCCGC TTGCGCTGCT GATCGATCGC CTGCGCACCA GCGGCCACCT GCCGGCCATG 
CCAGGCTTGG CGCAACGCGT GGTTCAGCTC TCGCGGATGG AGACGCAGCG CATCGACGAG 
CTGACCGATG TGGTGCTGGA GGATCCGGCC TTGTCGTTCG AGCTGCTGCG CACCGTCAAC 
GCCGCCCAGT TTCGCGTGCA GGCCGAAGAT GGCGTGACGA CGGTGCGCCG GGCCATCCAG 
CTCGTCGGCA TCAGCGGTGT GCGACGGGCT GCCGGCACCT TGCGTGCCTG GCCCGGCCCC 
CTGAACGAGC CGGCTGCGCG GGCCCTCGAG CAAGCGCTGA AACTCGCCTG CCTGGCCGGT 
CATCTGGCCG ATGTGCTGTC GCCCGGTGGA CTCGATGCCG AAGGCGCGCT GCTTGCCGCG 
CAACTGCAGC ATCTTGGTCG TTTGCTCGTG CGGTATCACT TTCCGGACGA GGCGGTTCAG 
ATCGCGGCCC TGATGCAGCC CAGTCCGCCG TTGCAGGAGG GTGACCCGGT CGCTCCCGGC 
CTGAGCGAAG AGGCTGCGGC CATGGCCGTT CTGGGCGTCG ACTTGGCTTC GATGGCACAC 
GCCATGGCCA AGCATTGGGG TCTGGACGAG TCGGTGCAGG ACATGATGCA ACCCCTGCCG 
TTGCGACACG CGGTCTACAT GCCGACCAGC GCCGACGGCT GGATGCGTGT CGTGGCCAGT 
TGTGCCAACG AAACGCTGGC GACGCTGAAG CTGGCCGGCG CGGCGCAGGC CCGGGCGCTG 
ACGCAGGTTG CCAACCGGTA TGCAAAGACG CTCGGAACCA CGCCCGACAA GCTCAAGCTG 
GCGCTGCAGG AGGCCAGGGT CAAGCTGAAC CAGCACCTCT CGACCAAGGC GGCTTGA 

 

Protein sequence

MAFESGQSHS SPDLISVSAN ASTAAHGHNA AAGIAGLRSF GRFALRQLIG RSSLSMAWIA 
HDTRSRRDVL LLIARQAIEE RRQLAEAVDA MRRAARLEHP RLLPAIETGE RDAWPYLVCE 
APQGVQTLSQ FLAGRPAPPP LEAAGWAVDA LEGLAYLHDA GLAHGDVGLH SLLLDKNGRL 
LVWGANLRAD VQGVTSGEFE SDLLRQQRAA GERDVLAIGL LLYQWVAHSA AFDERDMPTA 
IARLGQDIVR LPWALPQPVP DALRAIINRA TDRHAHRRYL GARSLERALS GWCRVQASDR 
GGPLALLIDR LRTSGHLPAM PGLAQRVVQL SRMETQRIDE LTDVVLEDPA LSFELLRTVN 
AAQFRVQAED GVTTVRRAIQ LVGISGVRRA AGTLRAWPGP LNEPAARALE QALKLACLAG 
HLADVLSPGG LDAEGALLAA QLQHLGRLLV RYHFPDEAVQ IAALMQPSPP LQEGDPVAPG 
LSEEAAAMAV LGVDLASMAH AMAKHWGLDE SVQDMMQPLP LRHAVYMPTS ADGWMRVVAS 
CANETLATLK LAGAAQARAL TQVANRYAKT LGTTPDKLKL ALQEARVKLN QHLSTKAA