Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2693 |
Symbol | |
ID | 6162371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2961779 |
End bp | 2963854 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641665470 |
Product | carbamoyl-phosphate synthase L chain ATP-binding |
Protein accession | YP_001791723 |
Protein GI | 171059374 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.25688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCACCA AGATCCTCAT TGCCAACCGC GGCGAAATCG CCTGCCGCGT CATCAAGACC GCCCAGAAGA TGGGCATCAA GACGGTGGCC GTCTATTCCG AGGCCGACCG CGACGCGCGC CACGTCGAAC TGGCTGACGA GTCCGTGCTG CTCGGCCCGG CGCCCTCGCG CGAGTCGTAT CTGGTCGCCG ACAAGATCAT TGCCGCCTGC AAGGCCACCG GCGCCCAGGC GGTGCATCCG GGCTACGGCT TTCTGTCCGA GAACGAGGCC TTTGCGCGCC GGCTCGAAGA AGAAGGCATC ACCTTCATCG GCCCCAAGCA CTATTCGATC GCGGCCATGG GCGACAAGAT CGCCTCGAAG AAGCTGGCAC TCGAAGCCAA GGTCAACACG ATCCCCGGCT ACAACAATGC CATCGACACG CCCGAGCAGG CGGTCGAGAT CGCCAAGGGC ATCGGCTACC CGGTGATGAT CAAGGCCTCG GCCGGCGGCG GCGGCAAAGG CCTGCGGGTC GCGTTCAATG ACAAGGAGGC CTTCGAGGGC TTCTCGTCAT GCCGCAATGA AGCGCGCAAC AGCTTCGGCG ACGACCGCGT GTTCATCGAG AAATACGTGC TCGAGCCGCG CCACATCGAG ATCCAGGTGC TCGGCGACAG CCACGGCAAC GTGCTGTACC TCAATGAGCG CGAATGCTCG ATCCAGCGCC GCCACCAGAA GGTGATCGAA GAGGCGCCGT CGCCCTTCAT CAGCGACGCC ACCCGCCGTG CGATGGGCGA GCAGGCCGTG GCATTGGCCA AGGCCGTGAA GTACCAGAGC GCGGGCACGG TCGAGTTCGT GGTCGGCAAG GACCAGGACT TCTATTTCCT GGAGATGAAC ACCCGCCTGC AGGTGGAGCA CCCGGTCACC GAGTGCATCA CCGGGCTGGA CCTGGTCGAG CAGATGATCC GCGTGGCCGC CGGTGAGGCG CTGACCTTCA AGCAGGAAGA CATCAAGCGC GACGGCTGGG CGATCGAGTG CCGCATCAAT GCCGAGGATC CGTTTCGCAA CTTCCTGCCG TCGACCGGCC GGCTGGTGCG TTATGCACCG CCGGCGCAGA CGCTCGAACA GTCGGTGCCC ACGCTCGAAG GCGAGGCCTA TGCGGGCGGC GCGTTCGGCG GTGTACGCGT GGACACCGGC GTCTACGAAG GCGGCGAGAT CCCGATGTTC TACGACTCGA TGATCGCCAA GCTGATCGTG CACGCGCGCA ACCGCACCGA GGCGATCGCC AAGATGCGCG AGGCGCTCAA CGGCTTCGTG ATCCGCGGCA TCAGCAGCAA CATCCCGTTC CAGGCCGCGC TGCTGGCGCA TCCGAAGTTC GTCACCGGCG AGTTCAACAC CGGCTTCATC GCCGAACACT ATGCCCACGG CTTCAAGGCC GAGGACGTGC CGCACGACGA CCCGCTGTTC CTGGTCGCGC TGGCCGCCTT CGTGCGCCGC AAGGCCCGCG AACGCGCGGC CGGCATCAGC GGCCAGCTGC CCGGCCACGG CGTGAAGGAC GCGCCCAACC TGGTGGTCGC GGTGCTGGGC GCGCAGGGTC AGCACGTCTA TCACGAGGTC ACCGTCAGCG GCTACGACGC AGTGGCCGAA ACCGCCAACG TGATCGTGGG CGAACAGACC TACGCCATCC GCAGCCACAC CAAGCTCGGC GACCTGCTGA TGACCGGCCT GTGCAACGGC CGGCCGTTCA TGGCGCAGGT CGAACGCGGT TCGGCCAAGA AGCCGCTGGC GATGCGCGTG GCCCACAACG GCACGCAGAT CGAGGCGATG GTGCTGTCGC CGCAGGCGGC GCAACTGATG AAGCTGATGC CCTACAAGGC ACCGGCCGAC ACCAGCAAGT TCCTGCTCTC GCCGATGCCG GGCCTGCTGG CCGACGTGTC GGTGCAGGTC GGCCAGACCG TGCAGGCGGG CGAGAAGCTC GCGGTGATCG AGGCCATGAA GATGGAGAAC ATCCTCAGCG CCGCGCAGGA CTGCGTGGTC GCCGAGGTGC TGGCCAAGAA GGGCGAGAGC CTGTCGGTCG ATCAGCCGAT CCTGCGGTTC GCCTGA
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Protein sequence | MFTKILIANR GEIACRVIKT AQKMGIKTVA VYSEADRDAR HVELADESVL LGPAPSRESY LVADKIIAAC KATGAQAVHP GYGFLSENEA FARRLEEEGI TFIGPKHYSI AAMGDKIASK KLALEAKVNT IPGYNNAIDT PEQAVEIAKG IGYPVMIKAS AGGGGKGLRV AFNDKEAFEG FSSCRNEARN SFGDDRVFIE KYVLEPRHIE IQVLGDSHGN VLYLNERECS IQRRHQKVIE EAPSPFISDA TRRAMGEQAV ALAKAVKYQS AGTVEFVVGK DQDFYFLEMN TRLQVEHPVT ECITGLDLVE QMIRVAAGEA LTFKQEDIKR DGWAIECRIN AEDPFRNFLP STGRLVRYAP PAQTLEQSVP TLEGEAYAGG AFGGVRVDTG VYEGGEIPMF YDSMIAKLIV HARNRTEAIA KMREALNGFV IRGISSNIPF QAALLAHPKF VTGEFNTGFI AEHYAHGFKA EDVPHDDPLF LVALAAFVRR KARERAAGIS GQLPGHGVKD APNLVVAVLG AQGQHVYHEV TVSGYDAVAE TANVIVGEQT YAIRSHTKLG DLLMTGLCNG RPFMAQVERG SAKKPLAMRV AHNGTQIEAM VLSPQAAQLM KLMPYKAPAD TSKFLLSPMP GLLADVSVQV GQTVQAGEKL AVIEAMKMEN ILSAAQDCVV AEVLAKKGES LSVDQPILRF A
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