| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2529 |
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| Symbol | |
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| ID | 6163984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2759328 |
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| End bp | 2760026 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665299 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001791559 |
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| Protein GI | 171059210 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00604151 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGCGCC TGCTTCTGAT CGACGACGAT GAACATCTGG CCGCGCCTCT GGCGGCCTAT
CTGCGCCGTT TCGACCTCGA CCTCGATCAC GCCGAACGTC CCAGCCTCGG CCTGCAGCGG
CTGGCCGGGG GCGGCTATGA CGCGGTGATC CTCGACGTCA TGCTGCCCGA GATGGACGGC
TTCGAGGTCT GCCGCGAAAT CCGCAAGACC AGCCAGATCC CGATCCTGAT GCTGACCGCG
CGCGGCGACG TGATGGACCG CGTGATCGGC CTCGAACTCG GCGCCGACGA CTACCTGCCC
AAGCCCTTCG AGCCGCGCGA GCTGGCGGCG CGGCTGCAGA CCATCCTGCG GCGCCAGCGT
GCGCCCGCGC CGGCAGCGGC GGCGGTGTCC ACGACCCCGC TCGTTTTCGA CGGACTCGTG
ATCGACCTCG AGCGCCGCCA GGTGCTGGTG CAGGGCCGGC CGGTCGAACT GACCGGCACC
GAGTTCGAGC TGCTGGTGCT GCTGGCGCGC GAGCCGCAGA AGGTGTTCAG CCGTGACGAC
ATCCTGATCC GCCTGCGCGG GCAGGAGTCC GACGACCTGT TCACGCGGGC GGTCGACATC
CTGGTCAGCC GGCTGCGCAA GAAGCTCGAG CCGCTCGATT GCATCAAGAC GCTGCGCAAC
GCGGGCTACG CCTTTGCCGG CGCCCGCCTC GTGCCGTGA
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| Protein sequence | MPRLLLIDDD EHLAAPLAAY LRRFDLDLDH AERPSLGLQR LAGGGYDAVI LDVMLPEMDG
FEVCREIRKT SQIPILMLTA RGDVMDRVIG LELGADDYLP KPFEPRELAA RLQTILRRQR
APAPAAAAVS TTPLVFDGLV IDLERRQVLV QGRPVELTGT EFELLVLLAR EPQKVFSRDD
ILIRLRGQES DDLFTRAVDI LVSRLRKKLE PLDCIKTLRN AGYAFAGARL VP
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