Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2511 |
Symbol | |
ID | 6161464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2739540 |
End bp | 2740289 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641665281 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001791541 |
Protein GI | 171059192 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00504203 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCTTCA GGCAACTCTT CGAACCGCTT TCGAGCACCT ACACCTACCT GATCGGCTGC GAGGACACCC GTCAGGCAAT CCTGATCGAC CCGGTGGTCA ACCGCATCGA CCACGACCTG GCGCTGCTGC GCGAGCTGGA GCTGATCCTG ATGGTGACGC TCGACACCCA CATTCACGCC GACCACATCA CCGCCGCGCT GCACCTCAAG CAGCGTGTCA ACAGCCGCAT CGGCGTGGCG GCGATGGACC GGCTGCCGTG CGCCGACATC GGCATCGTCG AAGGCCGGCC GCTCAAGCTC GGCAGCCTCA CGGTCGAGCC GCTGCACACG CCCGGCCACA CCGACAGCCA TTTCGCCTTC GTGGCGGGTG AGCGCGTGTT CACCGGCGAC GCGCTGCTGA TCGACGGCTG CGGCCGCACC GATTTCCAGA ACGGCGATTC GGCCGCGCTC TACCGCAGCG TGACCGACAA GCTGTTCGCG CTGCCCGACG ACCAGCTGGT CTACCCCGGC CACGACTACA ACGGCCGTCG TGTCTCGTCG ATCGGCCAGG AAAAGCAGCG CAACCCGCGC CTCGGCCAAG GCCGCTCGCT CGAGGAATTT GCGCAGCTGA TGGCCGGGCT GAACCTGCCG TACCCCAAGT TCATCGACCA CGCCGTGCCC GGCAACCGCC AGTGCGGCGT CTGCCCGACC GACCTGCCCG AGCAGATGAA GGCCTATTGC CAGACCATGA CCGAGAGCCG GCAAGGCTGA
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Protein sequence | MIFRQLFEPL SSTYTYLIGC EDTRQAILID PVVNRIDHDL ALLRELELIL MVTLDTHIHA DHITAALHLK QRVNSRIGVA AMDRLPCADI GIVEGRPLKL GSLTVEPLHT PGHTDSHFAF VAGERVFTGD ALLIDGCGRT DFQNGDSAAL YRSVTDKLFA LPDDQLVYPG HDYNGRRVSS IGQEKQRNPR LGQGRSLEEF AQLMAGLNLP YPKFIDHAVP GNRQCGVCPT DLPEQMKAYC QTMTESRQG
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