| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2507 |
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| Symbol | |
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| ID | 6162515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2733490 |
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| End bp | 2734533 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665277 |
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| Product | ribosomal RNA large subunit methyltransferase N |
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| Protein accession | YP_001791537 |
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| Protein GI | 171059188 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
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| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000368816 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCATTG ATTTCATACG CCAACGCCTG CGTGCCCAAG GTGCGAAACC CTGTCACGAA
CAGCGGATTT TGCGGATTTG GGCGCAGGTG CTGCCGACCG AAGGTGGCCG CAGTCGCCCC
GACGATTTCC TCCCGCAGGC CGTGCGCGAC GCCATGCCGG CGCTGCTGGC CGATCTGGAC
GGCCTGGCCC GCCTGCGCTC GCAGCACCCC GGCGAGGACG GTTCGGCGCG CCTGCTGGTC
GAACTGGCCG ATGGTCAGAC GGTCGAGAGC GTGTTGCTGC CGCGCGACGG TCTGTGCGTG
TCGACCCAGG TCGGCTGCGC GGTCGGCTGC GTGTTCTGCA TGACCGGGCG CGAGGGCCTG
CTGCGCCAGG TCGGCAGCGC CGAGATCGTG GCGCAGGTGG TGCTGGCGCG GCGCCAGCGG
CTGGTCAAGA AGGTGGTGTT CATGGGCATG GGCGAGCCCG CGCACAACCT CGACAACGTG
ATGGAGGCGA TCGACTTCCT CGGCACGACC GGCGCCATCG GCCACAAGAA CCTGGTGTTC
TCGACCGTGG GCGACCCGCG CGTGTTCGAG CGCCTGCCGC TCGGGCCGGT CAAGCCGGCG
CTGGCGCTGT CGCTGCACAC CACGCGGGCC GATCTGCGCG CGCAACTGCT GCCACGCGCG
CCGCGCATGG ACCCGGCCGA TCTGGTCGAG CGCGCCGAAG CCTATGCACG CGCCACCAGC
TACCCGATCC AGTACCAGTG GACGCTGCTC GAAGGCATCA ACGACGGGCC CGACGAGGTC
GAGGGCATCG TGCGGCTGCT GCACGGCAAG TACGCGGTGC TGAACATGAT TCCGTACAAC
ACGGTGCCCG ATCTGCCGTA CACGCGGCCG TCGTGGGAGG CCGCCGCCGC GCTGGCGCGC
ACGCTGCACC GGCGCGGCAT CCTGACCAAG CTGCGGCAAT CGGCCGGGCA GGACGTGGAG
GGTGGCTGCG GCCAGCTGCG CGCGCGTGAG CTGGCGCCGT CGGCGCGGCG CATCGAGATC
CGGCCGGTCG CCTCGCTGCC CTGA
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| Protein sequence | MRIDFIRQRL RAQGAKPCHE QRILRIWAQV LPTEGGRSRP DDFLPQAVRD AMPALLADLD
GLARLRSQHP GEDGSARLLV ELADGQTVES VLLPRDGLCV STQVGCAVGC VFCMTGREGL
LRQVGSAEIV AQVVLARRQR LVKKVVFMGM GEPAHNLDNV MEAIDFLGTT GAIGHKNLVF
STVGDPRVFE RLPLGPVKPA LALSLHTTRA DLRAQLLPRA PRMDPADLVE RAEAYARATS
YPIQYQWTLL EGINDGPDEV EGIVRLLHGK YAVLNMIPYN TVPDLPYTRP SWEAAAALAR
TLHRRGILTK LRQSAGQDVE GGCGQLRARE LAPSARRIEI RPVASLP
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