| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2496 |
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| Symbol | |
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| ID | 6160989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2717456 |
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| End bp | 2718373 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641665266 |
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| Product | phosphoribosylpyrophosphate synthetase |
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| Protein accession | YP_001791526 |
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| Protein GI | 171059177 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000000223709 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGATCA GCCAGGTTCT CGCCTTCGAC GACGAACAGG CCCCGGCCGG CGCGCTGGCG
CGCACGCTGG GCGTGCCGCT GGCGCTGATC GGGCGCCACC GTTTCCCCGA CGGCGAGATC
AGGCTGCGAC TGCCCGCGGC GCTGCACGGC AGCGTGCTGA TCTGGCGCGG CCTGCAGCAG
CCCAACGAGA AGCTGGTCGA GCTGCTGATC GGCGCGCCGA GCGCCCGCGA GCTGGGCGCG
CAGCGGCTGC TGCTGGTCAG CCCCTACCTG GCCTACATGC GCCAGGACAT CGCCTTCACG
CCCGGCGAGT CGGTCAGCCA GCGCCACATC GCGCGCCTGC TGGCGCAGCA TTTCGACGCC
GTGATCACGG TCGATCCGCA CCTGCACCGC ATCGCCTCGC TCGACGAGGT GATGCCCGCC
GGCCGCGGCG TCAGCCTGTC GGCCGCCGGC CTGCTCGGTG CCTGGGCGGC GCGCCAGGTG
CGCGACGTGC TGCTGCTCGG CCCGGACGAA GAATCGGCGC CCTGGGTGCG GTGTGCCGCG
CGCGACGGCG CCACCGCGCT CGGCCGGCCG CAGCCGCTCG ACCACGCCTG CTGCGTCAAG
CAGCGCAGCG GCGACCGCGA CGTGCGCGTC ACCTTGCCGC CCGGCCTGGC GCTGCAGGGC
CGCGCGGTGG TGCTGATCGA CGACATCGCC AGCACCGGCC GCACCCTGCT CGACGCCACG
AGGCAGTGCC TCGAGGGCGG CGCCGCCAGC GTCGACGTGG CGGTCACGCA CGCGCTGTTC
GTGGGCGACG CGCACACGCT GCTGCGGCAA GCCGGCGTGC GCCACATCTG GAGCACCGAC
TGCGTGCCGC ACGCCAGCAA TGCCGTCAGC GTGGTGCCGC TGCTGGCCGA GATCGTGCGC
GACAAGTTCA TGTCCTGA
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| Protein sequence | MTISQVLAFD DEQAPAGALA RTLGVPLALI GRHRFPDGEI RLRLPAALHG SVLIWRGLQQ
PNEKLVELLI GAPSARELGA QRLLLVSPYL AYMRQDIAFT PGESVSQRHI ARLLAQHFDA
VITVDPHLHR IASLDEVMPA GRGVSLSAAG LLGAWAARQV RDVLLLGPDE ESAPWVRCAA
RDGATALGRP QPLDHACCVK QRSGDRDVRV TLPPGLALQG RAVVLIDDIA STGRTLLDAT
RQCLEGGAAS VDVAVTHALF VGDAHTLLRQ AGVRHIWSTD CVPHASNAVS VVPLLAEIVR
DKFMS
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