| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2399 |
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| Symbol | |
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| ID | 6160889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2605169 |
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| End bp | 2606209 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641665169 |
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| Product | putative signal peptide protein |
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| Protein accession | YP_001791429 |
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| Protein GI | 171059080 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4255] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01552] prevent-host-death family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCCAT CCCCCGCCCA GCCCGCCCCG CACCTGCTGG TGCCCCACGC CAGCGGCATC
TCCGCCGCCG CCCAGGCCGC CTTGCAGGTG CTGAAACTGC CCCGCCTGGA AGCGCTGCTC
GAACGGCTGA CCGAAACCGG CGCACCCGGC CCCGCACCCT CGGCCCATGC GGCCCATGCC
AGCCGGCCGG GCACGGCCAC CGAGCACGAC GAAGCCGACG AATACAGCCT CAGCGCGCCG
CACGAACACG TGCTGGCGCA GCTCCACGGC TGGCAGGGCG GCGACGGCCG CTGGCCCTGG
GCCGCCGCGC TGGCCGCCGC CGACGGCGTG GCCGACGGCG GCGATCCGCA CACCGCCTGG
GGCCTGGTCA CGCCGGTGCA CTGGCAGGTC GGCAGCGACC AGATCTCGCT GCTCGACCCG
GCCCTGCTCG AGCTCGGCGC CGACGAATCG CGCGCGCTGT TCGAGGCCCT GCTGCCCTCT
TTCGAGGCCG AAGGCTGGCG CCTGATCTGG GGCGCGCCGC TGCGCTGGTA CGCCCGCCAC
GCCAGCCTGG CCGGCCTGCG CACCGCCTCG CTCGACCGCG CCATCGGCCG CAGCCTCGAC
CTCTGGCTCA GCGACGACCT GCAGGCGCGC CGCCTGCGCC GCCTGCAGGT GGAGGCGCAG
ATGCTGTGGC ACGAACACCC CGTCAACGAG GCCCGCGACG CGGCCCACCA GTGGCGCGTC
AACTCCTTCT GGCTCAGCGG CTGCGGCGTG GCCCAGCCGG TGCTGCCGAT CGCCGGCCTG
CAGGTCGACG ACAGCCTGCG CGCCGCCTTG CTGGCCGGCG ACTGGCAACG CTGGTGCGAC
GCCTGGCAGG CGCTCGACGC CGGGCCGATC ACCGAGCTGC TGGCGCGTGC CGAACGCGGC
GAGCCGGTCA CGCTGACGCT GTGCGGCGAA CGCCGCGCGC GCCAATGGCA GGCCCGGCCG
CAGGGCTGGC TGACGAAACT ACGCCGGCGC CTGGGCGGCG GCTCGGGCGG CGGTGCGGCG
GTCGTGCTGG GAGAACTTTG A
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| Protein sequence | MSPSPAQPAP HLLVPHASGI SAAAQAALQV LKLPRLEALL ERLTETGAPG PAPSAHAAHA
SRPGTATEHD EADEYSLSAP HEHVLAQLHG WQGGDGRWPW AAALAAADGV ADGGDPHTAW
GLVTPVHWQV GSDQISLLDP ALLELGADES RALFEALLPS FEAEGWRLIW GAPLRWYARH
ASLAGLRTAS LDRAIGRSLD LWLSDDLQAR RLRRLQVEAQ MLWHEHPVNE ARDAAHQWRV
NSFWLSGCGV AQPVLPIAGL QVDDSLRAAL LAGDWQRWCD AWQALDAGPI TELLARAERG
EPVTLTLCGE RRARQWQARP QGWLTKLRRR LGGGSGGGAA VVLGEL
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