| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2344 |
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| Symbol | |
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| ID | 6159721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2546580 |
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| End bp | 2547638 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641665113 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001791374 |
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| Protein GI | 171059025 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 133 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGGATG GTCATAGTAG TCAAAGAACT CTGTACTTAT GTTTGGTGAA ATCCTGCATG
ATGATTCGGA AGCAGTTAAT TTACGTTGCG TTGGTAGCAT GGCTGCTCTC TTTGTCCGCC
AGGGCTGCGT GTATAAATCC GGTTATGGGA ATAAATCTTG CTGGGGCCGA GTTTGCACCG
AGCGTACTTC CGGGAGTGGA GGGAATTGAA TACAAATTTC CAACGAGTAT TCAAATTGAA
AAATACATGC GAACAGGGTT TGGGGCGATC AGACTGCCAA TTCTTTGGGA AAGAATCCAG
CCTGAGTTAT ATGGCGACTT GCATGAGCAG TATGTCAGGT CCATAGAACG AGTTGCTCGG
GATGCGGAAA GGGTTGGAGT AAAGGTTGTA ATTGATCTTC ATAACTATGG AAGATATAGA
GGAAAGATCG TTGGCGTAGA TATTGATGGT GCTGCATTCA GGGATGTATG GAAAAGAATT
GCGATGCGCC TTCGGGAGCA CGGCAGCATT GCCGCGTATG GCCTCATGAA TGAACCGAAC
GATGCGCGGC GTGTGTGGCA CCGGATGGCC CAATTCGGTG TCGATGGAAT AAGGGATTCT
GATCGTCGAA AAGATATTTA TATTGGCGGT GACGGGTGGA GCAATGCGGT CCAATGGGTT
CAGGCTAACC CACGCCCATT TGTTATTGAT CCCGAGGGCC GAGAGCGATA CGAGGTTCAT
CTCTATCTTG ACGATGATGC CAGTGGGCGT TATCTCGAGG GGCATCCAAA ATCCGACCCC
GAATCTCGTG TGAGAGACCG ACTTGCACCG TACTTCGCAT GGCTAAAAAA GTACGGGAAA
GTAGGCGTAA TCGGCGAATT TGGTGTTCCG AGTGACGATG ATAAGTGGTT TTCTGGCGTA
CAAGAGTTTT ACGCTATCAC GAAAAACGCA TGCATAGATT CGTATTATTG GGCAGGGGGT
GCGTTTAGTC CAAAAAATAT TCTCTCACTT GAGCCTAGGA ATGGTGAGGA GAGGCTGTTA
ATGAAGAAAA TAAAATCATA TATAACTACC AGTAAATAA
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| Protein sequence | MRDGHSSQRT LYLCLVKSCM MIRKQLIYVA LVAWLLSLSA RAACINPVMG INLAGAEFAP
SVLPGVEGIE YKFPTSIQIE KYMRTGFGAI RLPILWERIQ PELYGDLHEQ YVRSIERVAR
DAERVGVKVV IDLHNYGRYR GKIVGVDIDG AAFRDVWKRI AMRLREHGSI AAYGLMNEPN
DARRVWHRMA QFGVDGIRDS DRRKDIYIGG DGWSNAVQWV QANPRPFVID PEGRERYEVH
LYLDDDASGR YLEGHPKSDP ESRVRDRLAP YFAWLKKYGK VGVIGEFGVP SDDDKWFSGV
QEFYAITKNA CIDSYYWAGG AFSPKNILSL EPRNGEERLL MKKIKSYITT SK
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