| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2197 |
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| Symbol | |
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| ID | 6161989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2396173 |
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| End bp | 2396409 |
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| Gene Length | 237 bp |
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| Protein Length | 78 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664965 |
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| Product | phage transcriptional regulator, AlpA |
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| Protein accession | YP_001791228 |
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| Protein GI | 171058879 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.376983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGCCA CCGCACCCAG CCAGACCGGC AAGCCCAAGA ACCCCCAGCC CATCGAAGCC
GCCGCACTGC CTGGCGCACT GCTGACGGCA CGCACCGTCT CGGCCGTGCT CGGCCTGTCG
GTGGCGACGA TCTACCGCCT GGCCGCAGCC GGCGACCTCA AGCCCGTCCG CATGGGACCG
CGCTGCACCC GCTGGCGCAG CGGCGACGTT CAGGCGTTCA TGGCCCGCCA GTCGTAA
|
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| Protein sequence | MQATAPSQTG KPKNPQPIEA AALPGALLTA RTVSAVLGLS VATIYRLAAA GDLKPVRMGP
RCTRWRSGDV QAFMARQS
|
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