8 homologs were found in PanDaTox collection
for query gene Lcho_2197 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_2197  phage transcriptional regulator, AlpA  100 
 
 		 78 aa  156  8e-38  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.376983 
 
 
-
 
NC_008340  Mlg_1062  phage transcriptional regulator, AlpA  42.11 
 
 		 75 aa  45.8  0.0002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.979085  normal  0.790745 
 
 
-
 
NC_008309  HS_0522  phage transcriptional regulator  30.99 
 
 		 73 aa  44.7  0.0004  Haemophilus somnus 129PT  Bacteria  normal  0.527959  n/a   
 
 
-
 
NC_014148  Plim_2648  Prophage CP4-57 regulatory  44 
 
 		 93 aa  43.9  0.0007  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.395704  n/a   
 
 
-
 
NC_010814  Glov_1128  hypothetical protein  33.96 
 
 		 65 aa  42.4  0.002  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_0638  phage transcriptional regulator, AlpA  33.33 
 
 		 66 aa  41.6  0.004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.0720576 
 
 
-
 
NC_010681  Bphyt_0154  phage transcriptional regulator, AlpA  46 
 
 		 80 aa  41.2  0.004  Burkholderia phytofirmans PsJN  Bacteria  normal  0.77914  normal  1 
 
 
-
 
NC_010682  Rpic_2749  phage transcriptional regulator, AlpA  42 
 
 		 67 aa  40.4  0.008  Ralstonia pickettii 12J  Bacteria  normal  0.496617  normal  1 
 
 
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