Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2173 |
Symbol | |
ID | 6163152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2379287 |
End bp | 2380279 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641664941 |
Product | alcohol dehydrogenase |
Protein accession | YP_001791204 |
Protein GI | 171058855 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.133443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAG CCATCCGCAT CCACCAGACC GGCGGCCCTG AAGTGCTCAC GCTCGAAAGC GTCGAGGTCG GCGATCCCGG CCCCGGCCAG GCGCGTGTGC GCCACAGCTT TGTGGCAGTC AACTTCATCG ACATCTACTT CCGCACCGGC CGCTACCCGA TGCCGCTGCC GAACGGCCTG GGCTCGGACG CCGTCGGCGT GGTCGAGGCG GTGGGCGAGG GCGTCACCGA GTTCAAGCCC GGCGACCGCG TCGGCTACCT GCTCGGGCCG CAGGGCGCGT ACAGCGACGT GCGCCTGATA CCGGCCGACG TGCTGATCCC GCTGCCCGAC GGCGTGTCCG ACCGCACCGC CTCGGCGCTG ATGATGAAGG GCATGACGGC GCAGTACCTG TTCCGGCAGG TCTACCCGCT GCAGGGCGGC GAGACCATCC TGTATCACGC CGCGGCCGGT GGTGTCGGCC TGGTGGCGTG CCAATGGGCA CGGGCGCTCG GCGTGACCAT GATCGGCACC GTCAGCACCG AAGAAAAAGC AGCGATCGCA CACGCCCACG GCTGTGCGCA CACCATCGTC ACCGGCGGCA CCGCGCCCGA AGCGCTCGCC GGCCTGATCG CCAAACGTGT GCGCGAGATC ACCGACGGCA AGGGTGTGCC GGTCGTCTAC GACTCGGTGG GCAAGGACAC CTTGATGGCT TCGCTCGACA GCCTGCAGCC GCGTGGCAGC CTGGTCAGCA ACGGCACCTC GTCGGGGCCG GTGGTGATCG ACACCACGCT GCTGGCGGTC AAGGGCTCGA TCTGGGTCAC GCGCCCGGCC ATGGTCCATT ACGCGACGCC GCGCAGCCAC ATGCTGGCGA TGGCGAACGA GCTGTTCGGC CACGTGCTGG CCGGGCGCAT CCAGGGTGAG CCGCAGCAGG TCTACGCGCT GGCCGACGCC GCCGAGGCGC ACCGCGCGCT CGAATCGCGC GCCACCGTCG GCGCCACCGT GTTGATTCCC TGA
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Protein sequence | MSKAIRIHQT GGPEVLTLES VEVGDPGPGQ ARVRHSFVAV NFIDIYFRTG RYPMPLPNGL GSDAVGVVEA VGEGVTEFKP GDRVGYLLGP QGAYSDVRLI PADVLIPLPD GVSDRTASAL MMKGMTAQYL FRQVYPLQGG ETILYHAAAG GVGLVACQWA RALGVTMIGT VSTEEKAAIA HAHGCAHTIV TGGTAPEALA GLIAKRVREI TDGKGVPVVY DSVGKDTLMA SLDSLQPRGS LVSNGTSSGP VVIDTTLLAV KGSIWVTRPA MVHYATPRSH MLAMANELFG HVLAGRIQGE PQQVYALADA AEAHRALESR ATVGATVLIP
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