Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2117 |
Symbol | |
ID | 6162037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2314457 |
End bp | 2315245 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641664886 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_001791149 |
Protein GI | 171058800 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.346332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCCT CCACCCTCGA CCTGCGCCGC CCCTCGCCCC ATGTGGCCGA GGTCTGGCTC AACCGCCCCG ACGTTCGCAA CGCCTTCAAC GACGACGTGA TCGCCGAGCT GACCGCCACG TTCGGCTCCC TGGCCGCCGA CCCCGACCTG CGCGTGATCG TGCTCGGCGG CCACGGCAAG GCTTTCTGCG CCGGCGCCGA CCTGAACTGG ATGCGCGCCA TGGCCGACTA CAGCTGGGAG CGCAACCGCG CCGACGCGCA GGCGCTGGCC GACATGCTGT GGGCGATCCA CAGCTGTCCG GTGCCCGTGA TCGGCCGCGT GCATGGCGAC TGTTATGCCG GCGGCGTCGG CCTGGCCGCT GTCTGCGACG TGCTGGTGGC CAGCGAGGCG GCGAGCTTCT GCCTGAGCGA AGCCAAGCTC GGCCTGCTGC CCGCCACGAT CGGGCCGTAC GTGGTCAAGG CGCTGGGCGA GCGCGCCTCG CAACGCTATT TCCTGACGGC CGAACGCTTC AGCGCCACCG AGGCGCATCG GCTCGGTTTC GTGCACGAGC TGTGCGCACC CGATCAGATC GACGAACGGG TGCAGGCGCT CGTCACCTCA CTCGTCGCCA ACGGCCCGGC TGCCGTCAAG GCCTGCAAGC AGCTGGTGCA GGACGTGGCC GCCCGCCCGA TCACCGCCGA GCTGCGCGAC GACACCGCGC GCCGCATCGC CGACATCCGC TGCAGCGCCG AAGGCAAGGA GGGCGTGTCC GCCTTCCTGC AAAAACGCTC GCCAAGTTGG CTGGTCTGA
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Protein sequence | MSASTLDLRR PSPHVAEVWL NRPDVRNAFN DDVIAELTAT FGSLAADPDL RVIVLGGHGK AFCAGADLNW MRAMADYSWE RNRADAQALA DMLWAIHSCP VPVIGRVHGD CYAGGVGLAA VCDVLVASEA ASFCLSEAKL GLLPATIGPY VVKALGERAS QRYFLTAERF SATEAHRLGF VHELCAPDQI DERVQALVTS LVANGPAAVK ACKQLVQDVA ARPITAELRD DTARRIADIR CSAEGKEGVS AFLQKRSPSW LV
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