Gene Lcho_2111 details

Gene Information

• Locus tag: Lcho_2111
• ID: 6162018
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 2307035
• End bp: 2308951
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 641664880
• Product: hypothetical protein
• Protein accession: YP_001791143
• Protein GI: 171058794
• COG category: [R] General function prediction only
• COG ID: [COG3211] Predicted phosphatase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 31
• Fosmid unclonability p-value: 0.291574
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCCAAAG ACTTTTCGAC CATGGAAGAC AGCAACCGCT CGGCCAACCG GAGCATCCAC 
GAGGTCTCCG AACCGAGCCG CCGCGTGGTG CTGCGCGGTG GCCTGGGCGC GCTGCTGGGC 
GGCACGCTCG CGCCGCTCGG CCTGGCCGGT TGCGCCACGC TCGGCGCCAG CAGTGGCGGC 
CCGCTGCTGG GCTTCAAGAG CGTGCCGGTG TCGACCGCCG ACACCATCAC CGTTCCGCCC 
GGCTACGTGG CGCAGGTGAT CGCCGCCTGG GGCGAGCCGG TCGGCATCGA AGGCCGCATG 
CCGGCGTTCA AGTTCGACGG CAGCAACACC TTCGCCGAGC AGGAAGCCCA GCTCGGCATG 
CACCACGACG GCATCCACTT CTATGCCCAG GATGGCGCCA AGCGCGGCCT GCTGGTGATG 
AACCACGAAT ACGTCGACGA CGGCCTGCTG CACACCAAGG GCACCGGCGT CTGGACCGCC 
AACAAGGTCA AGAAGTCGCA GGCCGCGCAC GGCGTGTCGG TGATCGAGGT CGAACTCAAG 
GACGGCCGCT GGCAGCAGGT GCTGCCCTCG AAGTTCGCCC GCCGCATCAC CGCCACCACG 
CCGATGACGC TGGCCGGCCC GGCCGCCGGC CATGCCCTGA CGAAGACCGC CGCCGACCCG 
AGCGGCACGA AGGTGCTGGG CACCTTCAAC AACTGCGGCA GCGGCATGAC CCCGTGGGGC 
ACCTACCTGA CCTGCGAAGA GAACTTCATC AACTATTTCA ACGGACCGGC CTCGCCGGAT 
GCCCACGGCA AGCGCTGGGG CCTGAAGAAG GTCGACGACA CGCTCTACCG CTGGCACGAG 
TTCGACGAGC GTTTCGACGC CGTCAAGAAC CCCAACGAGC CGAACCGCCA CGGCTGGGTG 
GTCGAGATCG ACCCGGCCAA GCCCGGCTCG ACCCCGGTCA AGCGCACTGC GCTCGGCCGG 
GCCGCGCATG AAGGCGCGAC CGTCGCCGTC ACCAAGGACC AGCGCGCCGT GGTCTATATG 
GGCGAGGACG CCCGCTTCGA ATACATCTAC AAGTTCGTCA GCCGCGACGC CATCAAGGCC 
GGCGGCGCGG CCGCCAACGC CACGCTGCTC GACCACGGCA CGCTCTACGT CGCCCGTTTC 
GACGCCGAAG GCAAGGGCAC CTGGCTGCCG CTGGTGCATG GCCAAGGCCC GCTGACGGCG 
GCCAACGGCT TTGCCGACCA GGGCGAGGTG CTGATCAAGA GCCGCCAGGC CAGCGATGCA 
CTGCGCGCCA CCAAGATGGA CCGCCCGGAG TGGACCGCGG TCGACCCCAA GACCCGCAAG 
GTCTACTGCA CGCTGACCAA CAACAGCAAC CGCGGCCGCG ACAAGCAGCC CGCCACCGAC 
GCCGCCAACC CGCGTGCCAA CAACACGATG GGCAACATCA TCGAGTGGCT CGACGACGGC 
GACTACAGCG GCACCACCTT CACCTGGAAG CACTTCGTGC TGGCCGGCGA CCCGGCGCTC 
GAGCGCGCCG ACGCCCGCGG CAACATCAAG GGCGACGCCT TCAGCTGCCC GGACGGCCTG 
TGGGTGGACG GCCGCGGCGT GATGTGGATC CAGACCGACA TGTCGACCTC GGCGATGGGC 
AAAGGCGACC TGGTCAACAT GGGCAACAAC CAGATGCTGG CGGCCGACCC GGCCAGCGGC 
GAGATCCGCC GCTTCCTGAC CGGCCCGCGC GGCTGCGAGA TCACCGGCGC CACCATGACG 
CCCGACAGCA CCACGATGTT CATCAACGTG CAGCACCCGG GTGAAAGCCC GAGCGAGCGC 
AGCGATCCGG ACGCGCCGGG CAAGATCTCC AACTGGCCCG ATCACAAGCA GGGCGGCCGC 
CCGCGTTCTG CCACGGTGGT GATCCGCAAG CTCGACGGTG GCGTGATCGG CAGCTGA 

 

Protein sequence

MSKDFSTMED SNRSANRSIH EVSEPSRRVV LRGGLGALLG GTLAPLGLAG CATLGASSGG 
PLLGFKSVPV STADTITVPP GYVAQVIAAW GEPVGIEGRM PAFKFDGSNT FAEQEAQLGM 
HHDGIHFYAQ DGAKRGLLVM NHEYVDDGLL HTKGTGVWTA NKVKKSQAAH GVSVIEVELK 
DGRWQQVLPS KFARRITATT PMTLAGPAAG HALTKTAADP SGTKVLGTFN NCGSGMTPWG 
TYLTCEENFI NYFNGPASPD AHGKRWGLKK VDDTLYRWHE FDERFDAVKN PNEPNRHGWV 
VEIDPAKPGS TPVKRTALGR AAHEGATVAV TKDQRAVVYM GEDARFEYIY KFVSRDAIKA 
GGAAANATLL DHGTLYVARF DAEGKGTWLP LVHGQGPLTA ANGFADQGEV LIKSRQASDA 
LRATKMDRPE WTAVDPKTRK VYCTLTNNSN RGRDKQPATD AANPRANNTM GNIIEWLDDG 
DYSGTTFTWK HFVLAGDPAL ERADARGNIK GDAFSCPDGL WVDGRGVMWI QTDMSTSAMG 
KGDLVNMGNN QMLAADPASG EIRRFLTGPR GCEITGATMT PDSTTMFINV QHPGESPSER 
SDPDAPGKIS NWPDHKQGGR PRSATVVIRK LDGGVIGS