| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2109 |
|---|
| Symbol | |
|---|
| ID | 6161347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 2305001 |
|---|
| End bp | 2305774 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641664878 |
|---|
| Product | ABC-type phosphate/phosphonate transport system periplasmic component-like protein |
|---|
| Protein accession | YP_001791141 |
|---|
| Protein GI | 171058792 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.734617 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACGG CGCCGTCCAC ACCCGGCGAC GCGAGCAAGG CTGCGACGCG CTATCGCCTC
TCGGTCTGCC CGCACGACAC GGCCAAGAAC CTGGCCGGCT GGTTCGTGCT CAACACCTAC
CTGCAGCGCA AGCTCGGCAT CGCGATGCGC TTCGAGCCGG CCGACAACTT CAACATCGAG
CGCGAGCAGG TGCTGGCAGG GGGCTACCAC CTGGTCTACG CCAACCCGTT CAGCGCACTG
CAGTTCCATC GCCAGCGCGG CTTCGTGCCG CTGGCACGGC CGGTGGCGCT GTTCGACGAG
ACCCTGCTGA TCGCGTCGGC CGGCAAGCTC CTGCCGGCCG ACGGGCCGCT GAAGATCGCG
TCGGCGACCG AAAAGCTGAT CGTGCACTTC CTCGGCCTGA CGCTGCTCGA TCAGCTGGGG
ATTGATCTGT CGCGCGCCAG CTACCAGTTC GTCGGCAACC ACCTCAAGGC CGCGCATGCG
GTGCTGAACG GCCAGGCCGA CGCCGCCTTC GTCTTCAACG AGACCTGGAA CGGCATGGCC
GCCAAGTCAC GCGCCGAACT GCAGGTGCTG GCCCAGACCG AGAGCCGGCA AGCGAGCCAC
TGCTTCTGCG TCGGCCCCGA ACTGGCCGAC CGGGCCGACG AGATCCGCGC GGTGCTCTGC
GACATGCAGA CCGATCCGGC CGGCCTGCGC ATCCTCGAAG ACCTGAATTT CAAAGGCTTC
GAGGCGATCG ACGTGGCCGC GGTCGAGCAG CTCGCGCAAC TGGTCGTCAG CTGA
|
|---|
| Protein sequence | MLTAPSTPGD ASKAATRYRL SVCPHDTAKN LAGWFVLNTY LQRKLGIAMR FEPADNFNIE
REQVLAGGYH LVYANPFSAL QFHRQRGFVP LARPVALFDE TLLIASAGKL LPADGPLKIA
SATEKLIVHF LGLTLLDQLG IDLSRASYQF VGNHLKAAHA VLNGQADAAF VFNETWNGMA
AKSRAELQVL AQTESRQASH CFCVGPELAD RADEIRAVLC DMQTDPAGLR ILEDLNFKGF
EAIDVAAVEQ LAQLVVS
|
|---|
| |