Gene Lcho_2075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2075 
Symbol 
ID6162453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2262924 
End bp2263706 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content71% 
IMG OID641664844 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001791107 
Protein GI171058758 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00165609 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGACCC TCGACGACCC CCTTCTGCTG CGCAGCCAGG ACGCCCGCGG CGTGCTGACC 
CTCACGCTCA ACCGCCCGCA GGCCTTCAAC GCCTTGAGCG AGGCGATGCT GGCGGCGCTG
CAGAAGGAAC TCACCGCGAT TGCCGCCGAC GACAGCGTGC GCGTGGTGGT GCTGGCTGCC
GCCGGGCGGG CCTTCTGCGC CGGGCATGAC CTCAAGGAAA TGCGCGCCCA GCCCGGCCTC
GACCACTACC GCCAGCTGTT CGACCAGTGC GGCCGCGTGA TGCTGGCGAT CCAGCGCCTG
CCGGTGCCGG TGGTGGCGCG GGTGCATGCC ACCGCCACCG CGGCGGGCTG CCAGCTGGTG
GCGGCCTGTG ACCTGGCCGT GGCGTCGAGC AGCGCGCGCT TTGCCGTCAG CGGCGTCAAC
CTCGGCCTGT TCTGCGCCAC GCCCAGCGTG GCATTGGCAC GCAACGTCGG CCGCAAGCAG
GCCTTCGAGA TGCTGGTCAC CGGCGAGTTC ATCAGCGCCG ACGAGGCCCA CGTGCGCGGC
CTGGTCAACC GCGTGGCCGC GCCCGAAGCG CTGGACGACG AAGTCGAGCG CCTGGTCGCC
AGCATCGTCG CCAAGCCGCG CGTGGCGCTG GCGATGGGCA AGCAGCTGTT CTACCGCCAG
CTCGAGATGG GCGTCGAGGC CGCCTACCAG GCCGCCACCC AGACGATGGC CTGCAACATG
ATGGACGAGA GCGCGCTCGA AGGCGTGCAG GCCTTCATCG ACAAGCGCGC GCCGAAGTGG
TGA
 
Protein sequence
MLTLDDPLLL RSQDARGVLT LTLNRPQAFN ALSEAMLAAL QKELTAIAAD DSVRVVVLAA 
AGRAFCAGHD LKEMRAQPGL DHYRQLFDQC GRVMLAIQRL PVPVVARVHA TATAAGCQLV
AACDLAVASS SARFAVSGVN LGLFCATPSV ALARNVGRKQ AFEMLVTGEF ISADEAHVRG
LVNRVAAPEA LDDEVERLVA SIVAKPRVAL AMGKQLFYRQ LEMGVEAAYQ AATQTMACNM
MDESALEGVQ AFIDKRAPKW