| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1954 |
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| Symbol | |
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| ID | 6162036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2117347 |
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| End bp | 2118924 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664723 |
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| Product | protein of unknown function DUF853 NPT hydrolase putative |
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| Protein accession | YP_001790986 |
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| Protein GI | 171058637 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0433] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAC CCATCCTGCT TGCCCAACAC GGCGAGATCG AATGCCACAT GCTGCCGGCG
CTGGCCAACC GTCACGGCCT GATCACCGGC GCCACCGGCA CCGGCAAGAC CATCACGCTG
CAGAAGCTGG CCGAGAGCTT CTCGCTGATC GGCGTGCCGG TCTTCATGGC CGACGTCAAG
GGCGACCTGA CCGGCATCAC GCAGACCGGC AGCGCCAACG CCAGGCTGGC CAAGGTGCTG
GCCGAACGCG GCTTGCCCGA GCCGGCCTGG GGCGCCTGCC CGGCCACGCT GTGGGACGTC
TTCGGCGAGC AGGGCCACCC GGTGCGCGCC ACCGTGTCCG ACATGGGCCC GCTGCTGCTG
GCGCGCATGC TCAACCTCAA CGAGACGCAG CAGGGCGTGC TGTCGATGGC GTTTCGCATC
GCCGACGACA ACGGCCTGCT GCTGCTCGAC CTGAAGGATC TGCGCGCCAT GCTGCAGTAC
CTGGGCGAGA ACGCCAGCGA GTTCACGACC GAATACGGCA ACATCAGCGC CGCCTCGGTG
GGCGCGATCC AGCGCGGCCT GCTGCAGATC GAGGAGCAAG GCGGCGACAG GTTCTTCGGC
GAGCCGATGC TCGCGATCGA CGACTTCATG CAGACCGTCG ACGGCCGCGG TGTCATCAAC
ATCCTGGCCG CTGACAAGCT GATGAACGCG CCGCGGCTCT ACGCCACCTT CCTGCTGTGG
ATGCTGTCGG AGCTGTTCGA ACTGCTGCCC GAGGTCGGCG ACCTCGAGAA GCCCAAGCTC
GCGTTCTTCT TCGACGAGGC GCACCTGCTG TTCAAGGACG CGCCGGCCGC GCTGGTCGAG
CGCATCGAGC TGGTGGTGCG GCTGGTGCGC TCCAAGGGCG TGGGCGTCTA TTTCGTGACG
CAGAACCCGC TCGACATCCC CGACAGCGTG CTCGGCCAGC TCGGCAACCG CATCCAGCAC
GCGCTGCGCG CCTTCACGCC GCGTGACCAG AAGGCGGTCA AGGCGGCGGC CGAGACCATG
CGCGCCAACC CCGGGCTCGA CGTCGCCAGC GCGATCACCG AGCTGGCGGT CGGCGAGGCG
CTGGTCAGCC TGCTCGACGA GAAGGGCCGC CCGGGCGTGA CCCAGCGCGT CTTCGTGCTG
CCGCCGGGCA GCCAGATCGG CCCGATCGAT GCCGAGCAGC GCAAGCGCCT GCTCGCCGAA
TCGCTGGTCG CGGGGGTCTA CGAAAAGACC ATCGACCGCG AATCGGCGCA TGAAAAGCTC
AAGGGCCGCG CCGCGCAATC CGTCGAAGCG GGCGAACACA AGCGTGACGG TGGCGGCCTG
GCCGGCCGAG GCGCCGGTGC GGGCGAGGCC GCCCCCGGTG CCGCCGACGA GAGCGGCGGC
GGCATGGCGG GCGCGCTGAT GAGCGGCCTG GGCGGCTTGC TGTTCGGCTC GACCGGGCCG
CGCGGCGGCC GCCATGACGG CCTGGCGCAG ACCATGGCCA AGTCGGCGGT GCGCTCGGTC
GGCTCGGCGG TCGGCCGCGA GATCATCCGC GGCGTGCTGG GCTCGCTGCT GGGCGGCGGC
TCGTCACGGC GTCGCTGA
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| Protein sequence | MAEPILLAQH GEIECHMLPA LANRHGLITG ATGTGKTITL QKLAESFSLI GVPVFMADVK
GDLTGITQTG SANARLAKVL AERGLPEPAW GACPATLWDV FGEQGHPVRA TVSDMGPLLL
ARMLNLNETQ QGVLSMAFRI ADDNGLLLLD LKDLRAMLQY LGENASEFTT EYGNISAASV
GAIQRGLLQI EEQGGDRFFG EPMLAIDDFM QTVDGRGVIN ILAADKLMNA PRLYATFLLW
MLSELFELLP EVGDLEKPKL AFFFDEAHLL FKDAPAALVE RIELVVRLVR SKGVGVYFVT
QNPLDIPDSV LGQLGNRIQH ALRAFTPRDQ KAVKAAAETM RANPGLDVAS AITELAVGEA
LVSLLDEKGR PGVTQRVFVL PPGSQIGPID AEQRKRLLAE SLVAGVYEKT IDRESAHEKL
KGRAAQSVEA GEHKRDGGGL AGRGAGAGEA APGAADESGG GMAGALMSGL GGLLFGSTGP
RGGRHDGLAQ TMAKSAVRSV GSAVGREIIR GVLGSLLGGG SSRRR
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