| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1930 |
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| Symbol | |
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| ID | 6160200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2092841 |
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| End bp | 2093794 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664696 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790962 |
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| Protein GI | 171058613 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0562789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGC CATCCGAATC GACGTCTGCC ACACCCGCCG GCCGCGCGTC GGACTCGACC
GAGCTCTGGC TCGCCAGCAT GCCGGCGGTG TTCGTGCTGA TCTGGAGCAC CGGCTTCATC
GTCGCGCGTT ACGGCATGCC GCATGCGCCG CCGCTGGGCT TCCTGTCGTT GCGCTATGCG
TGCTCGATCG CCTGCCTGGG CGCCTGGATC GCCTGGAGCG GCGCCCGCTG GCCGCAGGGC
CGGGCGCAAT GGGGCCATCT GGCTGTCACC GGCGTGCTGA TGCACGCGGG CTATCTCGGC
GGCGTCTGGG CCGCCGTGAA GATGGGGATC GGCGCCGGCA CGGTGGCCCT GATCGTCGGT
CTGCAACCGC TGCTGACGGC GGTGTGGGTG ACCTGGCGCG GCGAACGCGG CCCGTCGTCG
ACCGCGGGCT CAGCGGCACA TCGTCTGGGC AAGCAGCAGT GGCTCGGCCT GCTGATGGGC
CTGGCCGGCC TCGCGCTGGT GGTCGAACGC AAGCTGGCTC AGGGCGAGAT CACGCCCGGC
AACCTGGCGC TGGCGGTGCT GGCCTTGCTG AGCATCACGG CGGGCACGCT CTACCAGAAA
CGTCACCTCG CGCCCTGCGA TGTCCGCACC GCCAACACGG TGCAGCTGCT CGCCGCGCTG
GCCGTGAGCT TGCCGCTGGC CCTGCTGGAG CCCGAGGCGA TCGACTGGCA TCCCGAGATG
ATCGGCGCGC TGGCATGGTC GGTTCTGGCG CTGACGCTGG GCGGCAGTTC GCTGCTCTAC
CTGCTGATCC AGCGCGGCGC GGCAACCCGT GTCACCAGCC TCATGTACCT GGTGCCGCCC
TGCACGGCGG TGCTCGCGAT GCTGCTGTTC GACGAAGCGC TCGGCCCCAC CGTGCTGGCA
GGCATCGTCA TCACGGTGGC GGGGGTGGCG CTGGTGGTGC GCTCGCCCCG TTGA
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| Protein sequence | MATPSESTSA TPAGRASDST ELWLASMPAV FVLIWSTGFI VARYGMPHAP PLGFLSLRYA
CSIACLGAWI AWSGARWPQG RAQWGHLAVT GVLMHAGYLG GVWAAVKMGI GAGTVALIVG
LQPLLTAVWV TWRGERGPSS TAGSAAHRLG KQQWLGLLMG LAGLALVVER KLAQGEITPG
NLALAVLALL SITAGTLYQK RHLAPCDVRT ANTVQLLAAL AVSLPLALLE PEAIDWHPEM
IGALAWSVLA LTLGGSSLLY LLIQRGAATR VTSLMYLVPP CTAVLAMLLF DEALGPTVLA
GIVITVAGVA LVVRSPR
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