| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1927 |
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| Symbol | |
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| ID | 6159767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2088954 |
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| End bp | 2089880 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641664691 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001790959 |
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| Protein GI | 171058610 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.109839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGACG TCCTCACGGT ATCAGGCCTC TACAAGACCT ACGCATCGGG GCACGACGCC
CTCAAGAACA TCAATCTGTC GATCCGGCGC GGCGAGATCT TCGCCCTGCT CGGCCCCAAC
GGGGCGGGCA AGACGACGTT GATCAGCATC GTCTGCGGCA TCGTCAACCC GAGCCAGGGC
AGCGTGCGCG TCGATGGCCA CGACATCGTG CGCGACTACC GGGCCGCACG CGCGCTCATC
GGCCTGGTGC CGCAGGAGCT GACGACCGAT GCGTTCGAGT CGGTCTGGGG CAGCGTCTCG
TTCAGCCGCG GCCTGTTCGG CAGACCGCCC GATCCGGCGC ACATCGAGAA GGTGCTCAAG
GCGCTCTCGC TGTGGGAGAA GAAGGACAGC AAGATCATCA CCCTGTCGGG CGGCATGAAG
CGGCGCCTGC TGATCGCCAA GGCACTGTCG CACGAGCCGC AGATCCTGTT CCTCGACGAG
CCCACCGCGG GTGTCGACGT CAACCTGCGG CGCGACATGT GGCAGCTCGT GCGCGCCTTG
CGCGACACCG GCGTGACCAT CATCTTGACC ACCCACTACA TCGACGAGGC CGAGGAGATG
GCCGACCGCA TCGGCATCAT CCGCAAGGGC GAGATCATCC TGGTCGAGGA CAAGGCCGAG
CTGATGCGCA AGCTCGGCCG CAAGCAGCTG ACACTGCAGT TGCAGCAGCA TCTGAAGATG
CTGCCACCCG CGCTCGATGC CTATCGGCTC GAACTGTCGG ACGACGGCAG CGAGCTGACC
TACACCTACG ACGCCCAGGT CGATCGCAGC GGCATCGCCA CCTTGCTGAA AGACCTCGGC
GACGCCGGCA TCGCCTTCAA GGACCTGCAC ACCACGCAGA GTTCGCTCGA GGACATCTTC
GTCAACCTGG TGCGGGGCGG CCAATGA
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| Protein sequence | MHDVLTVSGL YKTYASGHDA LKNINLSIRR GEIFALLGPN GAGKTTLISI VCGIVNPSQG
SVRVDGHDIV RDYRAARALI GLVPQELTTD AFESVWGSVS FSRGLFGRPP DPAHIEKVLK
ALSLWEKKDS KIITLSGGMK RRLLIAKALS HEPQILFLDE PTAGVDVNLR RDMWQLVRAL
RDTGVTIILT THYIDEAEEM ADRIGIIRKG EIILVEDKAE LMRKLGRKQL TLQLQQHLKM
LPPALDAYRL ELSDDGSELT YTYDAQVDRS GIATLLKDLG DAGIAFKDLH TTQSSLEDIF
VNLVRGGQ
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